Costertonia aggregata: HYG79_02065
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Entry
HYG79_02065 CDS
T06693
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cagg
Costertonia aggregata
Brite
KEGG Orthology (KO) [BR:
cagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cagg03009
]
HYG79_02065 (rimO)
Enzymes [BR:
cagg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HYG79_02065 (rimO)
Ribosome biogenesis [BR:
cagg03009
]
Prokaryotic type
ribosomal protein modification factors
HYG79_02065 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QLG44180
UniProt:
A0A7H9AL39
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All DBs
Position
complement(441527..442828)
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AA seq
433 aa
AA seq
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MRTKTLKKNKINVVTLGCSKNVYDSEVLMGQLSANKKDVVHEGEGNVVVINTCGFIANAK
EESVNTILEYVQKKEAGEVDKVFVTGCLSERYKPDLQKEIPDVDEYFGTSELPNLLKALG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSKPIEELVTEAQKLA
AKGVKELILIAQDLTYYGLDLYKKRNLAELLKHLVKVEGIEWIRLHYAFPTGFPMDVLDV
MKNEPKICNYLDIPLQHISDSILKSMRRGTTQAKTTKLLQDFRDAVPGMTIRTTLIVGYP
GETQQDFETLRNWVEEMRFERLGCFTYSHEENTHAYTLHDDVPEDIKQQRANEIMEIQSQ
ISWELNQQKIGKTFKCIIDRKEGNYFVGRTEFDSPDVDNEVLIDAAKHYVKQGEFIDIKI
TEAADFDLYGEPV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaaaacacttaaaaagaataaaatcaatgtggttaccttggggtgtagcaaa
aatgtttatgattccgaggtactcatggggcaattgagcgccaataaaaaggatgttgta
catgaaggggaaggtaacgttgttgtcatcaatacctgtgggttcatagccaatgccaaa
gaggagagcgtcaataccattttggaatatgtacagaaaaaagaagctggcgaggttgat
aaggtttttgttacgggatgtttgagcgaacgctataaaccagacctgcaaaaagaaatt
cccgatgtggatgaatattttggtacaagtgagttgccaaacctacttaaagccttgggc
gcagactataagcatgagttgattggggagcgtttgacgacgacacccaaaaactatgca
tatttgaagatagctgaaggatgtgaccgaccttgttcgttttgtgcaatccctttgatg
cggggcaagcacaaaagcaagcctattgaagaattggtgaccgaggcccaaaaactggct
gccaaaggcgtaaaagaacttatccttattgctcaggatttaacctattatggattagat
ctgtacaaaaaaagaaatttggccgagcttcttaaacatctggtcaaagtcgaaggcatc
gagtggatacgtttgcactatgcttttcctactggttttcctatggatgtgcttgacgtg
atgaaaaacgaacctaaaatctgtaattatctggacataccgttacaacatatatccgat
agtatattgaaaagcatgcgccgcggaacaacgcaggccaagactacgaaattgcttcag
gattttagggacgccgttcccggaatgaccatacgaaccactttgatagtggggtatcca
ggtgagacccaacaagattttgaaacgctacgcaactgggtcgaggaaatgcgttttgag
cgtttggggtgtttcacctacagccacgaggaaaatacacatgcttataccctgcatgac
gacgtgccagaagacataaagcagcagcgggccaacgaaatcatggaaattcaatcccag
atttcatgggaattgaaccaacagaaaattggtaagacctttaaatgtatcattgacaga
aaagaaggaaattattttgtgggcaggaccgaatttgactcgcctgatgttgacaatgaa
gttttaatagatgctgcaaagcattatgtaaagcaaggcgagttcatagacataaaaatt
accgaagctgccgattttgatttatacggtgaacctgtttaa
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