Costertonia aggregata: HYG79_04275
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Entry
HYG79_04275 CDS
T06693
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cagg
Costertonia aggregata
Pathway
cagg03030
DNA replication
cagg03410
Base excision repair
cagg03420
Nucleotide excision repair
cagg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYG79_04275 (polA)
03410 Base excision repair
HYG79_04275 (polA)
03420 Nucleotide excision repair
HYG79_04275 (polA)
03440 Homologous recombination
HYG79_04275 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cagg03032
]
HYG79_04275 (polA)
03400 DNA repair and recombination proteins [BR:
cagg03400
]
HYG79_04275 (polA)
Enzymes [BR:
cagg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYG79_04275 (polA)
DNA replication proteins [BR:
cagg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HYG79_04275 (polA)
DNA repair and recombination proteins [BR:
cagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HYG79_04275 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYG79_04275 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QLG44594
UniProt:
A0A7H9AMI8
LinkDB
All DBs
Position
936939..939773
Genome browser
AA seq
944 aa
AA seq
DB search
MADQKRLFLLDAYALIFRGYYALIKNPRINSKGMDTSAIMGFMNSLFDVIKREKPDHLAV
CFDKGGSAERTEMFPEYKANRDETPDAIRIAIPYIQDILKAMHIPSVVLEGWEADDIIGT
LAKQAEKEDYKVFMVTPDKDFGQLVSENIFMYRPARMGNGIEIWGIPEVQKRFGVERPEQ
VIDYLGMMGDASDNIPGLPGVGDKTAKKFIEEFGSMEALLANTDKLKGKMKEKVEENAEL
GLLSKKLATICIDCDVKFNAKDYEMSIPDNEKVQEIFEELEFRRLKDQFLKIFSGDEDTA
QTQVTSSETAKKVSTSAGSGQFSLFGGDGASPATIKDTNSRNTIKDIPHVYQSVAPGMAM
KLFLQNLMKQTSVCFDTETTGLNPLTAELVGIAFSWEATKGFYVPFPDDKNETQELVEQL
RPFFESESIEKIGQNLKYDIKVLHKYNVQVKGKLFDTMLAHYLINPDMRHNMDVLAETYL
NYTPVSITELIGKKGKNQLSMRDVALEKQTEYAVEDADITFQLAQHFRPELAEAKTDGLF
NDIEIPLLRVLADMELEGINLDKEFLNSLSSDLNNDIAELEQKIYKAAGQEFNIGSPKQL
GEILFDKLKLVDKPKKTKTGQYSTAEDVLSYLAKDHEIIQNVLDYRGLSKLKSTYVDALP
EQVEPSSGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPRNEDYILLAA
DYSQIELRIIAALSEEDTMIQAFKNGEDIHASTASRVFNVPIGQVTREQRSNAKTVNFGI
IYGVSAFGLSNQTDLSRAESKELIDTYYKTYPKLRNFMSELVDFARDNGYVQTVLGRRRY
LKDINGSNAVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLSKGNYKSKMLLQVHDEL
VFDIYKPELEELKTLIKNEMESAYTLAVPLDVELGSGDNWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaaaagactttttttacttgatgcatacgcattgatattccgcggctat
tatgcccttatcaaaaatccaagaatcaattccaaaggcatggatacttcggccatcatg
ggatttatgaactcgctttttgatgtcataaaacgggaaaaaccggaccatttggccgta
tgttttgacaaaggaggaagtgcggagcgtaccgagatgtttcccgaatacaaagccaat
cgtgacgagacccccgatgccatacgtattgccataccctacatacaagatattctcaaa
gccatgcatatcccatctgtggttttggaaggttgggaagccgatgatatcattggcaca
cttgccaaacaggccgaaaaagaggactacaaggttttcatggtaaccccggacaaggac
tttgggcagttggtctccgagaacatctttatgtaccgtccggcccgtatgggtaacggc
atcgaaatttggggcattcccgaagtccagaaacgctttggcgtggaacgccccgaacag
gtcatagattatttggggatgatgggcgatgccagtgacaatattcccggattgcccgga
gtaggtgataaaacggccaaaaaattcattgaagaatttggctctatggaagcgttattg
gccaacaccgataaattaaagggcaaaatgaaggaaaaggtcgaggaaaatgcagaattg
ggccttctttccaaaaaactggcgaccatttgcattgattgcgatgtaaaattcaatgcc
aaggactacgaaatgtctatccccgataatgaaaaagttcaggaaatttttgaagaattg
gaatttagaaggctcaaagatcaattcttgaaaatattttccggcgatgaagatacggcg
caaactcaagttacaagtagcgaaaccgctaaaaaagtctctacatctgctggcagtggt
caattctctttgtttggtggtgatggggcctcgccggccacgataaaagatacaaatagc
agaaatacgataaaagatattccccacgtctaccaaagcgttgctcccggaatggccatg
aagctctttttacagaatttgatgaaacagacttcagtatgttttgatacggaaacaaca
gggttgaatccgttaacggccgaactggtcggaatcgctttttcatgggaggctacaaaa
ggattttatgtaccgttcccggacgataaaaatgaaacacaagaacttgtagaacagctt
agaccattttttgaatcggaaagcatcgaaaaaatagggcagaacctaaaatatgatatc
aaagtacttcataaatacaacgttcaggtaaaagggaaactctttgataccatgctggca
cattacctcatcaatccagatatgcgccacaatatggatgtacttgccgagacctatcta
aattatacaccggtttctattacagaactcattggcaaaaaagggaagaaccaactttct
atgcgtgatgttgctttggagaaacaaacagaatatgccgtagaggatgcggatattacc
tttcagctggcacaacattttagacccgaactggccgaagccaagactgacggactcttt
aatgatattgaaatcccactattacgggtgttggccgatatggagttggaaggcatcaat
ttagataaggaattcttgaattcactttccagcgatttaaacaatgacatcgccgaactt
gaacaaaaaatatacaaagctgccgggcaggagttcaatattggctcaccaaaacaattg
ggcgaaatcctttttgataaattaaaacttgttgacaaacccaaaaagacaaaaacgggg
cagtattccaccgcagaagatgtactttcttatttggccaaagaccatgaaattattcaa
aacgttctggactaccgcggactttcgaaactaaagagcacgtatgttgatgcactgccg
gaacaggtagagccatcctcagggcgtgtgcatactgattacatgcagaccgtcgctgcc
acaggccgtttgagcagcaataaccctaatttacagaatattcctatccgcaccgaacgt
ggtcggcaggtgcgaaaggcctttgtcccacgcaacgaagattatattttgttggctgcg
gattattcacagatagaactccgtatcatcgccgctctgagcgaagaggacaccatgata
caagcgttcaaaaacggagaagatattcatgcttcaaccgcatcacgggtttttaatgta
cccattggacaggtaacccgtgaacagcgaagcaatgccaaaaccgtaaattttggcatc
atatatggcgtatcggcttttggcttgagcaaccagaccgatctttcccgtgcggaatca
aaagagcttatcgatacttattacaaaacgtaccctaagcttcgtaacttcatgagcgaa
ctggtagactttgcccgtgacaacggctatgtacaaaccgttttaggaaggcgtagatat
ctaaaagatatcaatgggagtaatgccgtggtgcgtggcgccgcagaacgcaatgccgta
aatgctcctattcagggaagtgctgcggacatcatcaaaattgcgatgataaacattcat
aaaaagttatccaaaggcaattacaaatcaaaaatgcttttacaagtgcacgatgaattg
gtttttgacatctacaaaccagaattggaagaactgaaaaccttgattaaaaatgaaatg
gaaagtgcctatacacttgcagtgcctttggacgttgagttggggtcaggtgataattgg
ttggaagcgcattga
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