Costertonia aggregata: HYG79_06240
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Entry
HYG79_06240 CDS
T06693
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cagg
Costertonia aggregata
Brite
KEGG Orthology (KO) [BR:
cagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cagg03032
]
HYG79_06240
03400 DNA repair and recombination proteins [BR:
cagg03400
]
HYG79_06240
Enzymes [BR:
cagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYG79_06240
DNA replication proteins [BR:
cagg03032
]
Prokaryotic type
DNA Topoisomerases
HYG79_06240
DNA repair and recombination proteins [BR:
cagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYG79_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QLG44966
UniProt:
A0A7H9ANF0
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All DBs
Position
1352627..1353706
Genome browser
AA seq
359 aa
AA seq
DB search
MKTDPSLLNTLLSEPKKAISHLDLVYVSDDKMPIIRKKNGDGFQYLYGDRALRQKEDLQR
IKALVIPPAWQNVKITHLPNGHLQAVGRDTKKRKQYKYHELWTKVRKQTKFYRMGLFGKS
LPKIRKTVDLDLEQKKWTRTKVLALVVRLMEETHIRIGNEQYARYNQTYGISTLRKRHVH
INKEKMKFEFKGKRGKEHKVTVRNKKLIRLVSQCEEIPGWELFHYYDNDGNKEQIDSGMV
NAYVKEISGMDFTAKDFRTWAAGVIFFNSLMDMGTTKDKEGIKSNILAAYDTTAKALGNT
RNVCRSSYVHPILPMAYEKGKLNIYFEKASRPDAVTKYLSSSEIALLDVIATYKPELKE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagacccttctctattaaatactttactaagcgagccaaaaaaggcaataagc
catttagatcttgtatatgtatctgatgacaaaatgcccatcatacgtaagaaaaacggc
gatggttttcaatatctatatggtgatagggcattaagacaaaaagaagatctacaacgt
atcaaagcattggtgattcccccagcatggcaaaatgtaaagattacccatctacccaat
gggcatctgcaagccgtgggcagggataccaaaaaacgcaaacagtacaagtaccacgag
ctctggaccaaggttcgcaaacagaccaaattttatcgtatgggcctattcgggaaatcc
cttcccaaaatccgaaaaaccgttgacttagatctggaacaaaaaaaatggacaagaacc
aaagtgctggccttggtggtacgccttatggaagagacccacatacgaataggtaacgaa
caatatgcgcgatacaatcaaacttacggcatttccacactcagaaaacgccatgtacat
atcaacaaagaaaagatgaaatttgagttcaagggaaaaagaggtaaggagcataaggtg
acggtccgaaataaaaaattgattcgcttggtaagccaatgtgaagaaataccgggttgg
gaattattccattattacgataacgatggaaacaaagaacaaatcgacagcggaatggtc
aatgcctatgtaaaggaaataagcggaatggactttaccgcaaaagattttagaacctgg
gccgctggtgtgatttttttcaactctcttatggatatgggcactaccaaagataaagaa
ggcattaaatcaaatatactggcagcttatgataccacggccaaagcactcggcaacacg
cgcaacgtatgccgaagttcatatgtacacccaatactaccaatggcctatgaaaaaggg
aaattgaacatctattttgaaaaagcgagccgcccagacgccgtaaccaaatatttatcg
tcttcggagatagctcttttagatgtaatagcgacatataaacctgaattaaaagaataa
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