Costertonia aggregata: HYG79_07800
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Entry
HYG79_07800 CDS
T06693
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cagg
Costertonia aggregata
Pathway
cagg00521
Streptomycin biosynthesis
cagg00523
Polyketide sugar unit biosynthesis
cagg00525
Acarbose and validamycin biosynthesis
cagg00541
Biosynthesis of various nucleotide sugars
cagg01100
Metabolic pathways
cagg01110
Biosynthesis of secondary metabolites
cagg01250
Biosynthesis of nucleotide sugars
Module
cagg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cagg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HYG79_07800 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HYG79_07800 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HYG79_07800 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HYG79_07800 (rfbB)
00525 Acarbose and validamycin biosynthesis
HYG79_07800 (rfbB)
Enzymes [BR:
cagg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HYG79_07800 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QLG45253
UniProt:
A0A7H9APD8
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Position
complement(1686398..1687396)
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AA seq
332 aa
AA seq
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MTTLVTGGAGFIGSNFIPYFLDKNPNTTVINLDKLTYAGDLNNLDEVSQTNRYRFVQGDI
CNQTLIDSIFTTHKIDSVIHFAAESHVDKSISNPDSFIKTNIEGTYTLLEAARKHWGENN
QSNRFHHISTDEVYGSLGDSGFFNEKTPYAPNSPYSASKAASDFLVRSYYHTFKLNTITT
NCSNNYGPKQHDEKLIPTIIRTALQGSTIPIYGKGTNVRDWLYVLDHCKGIDTVFKKGRP
GETYLIGGNNESTNLSIAEKICSILDELLPKAKGSYKDQIAFVEDRKGHDHRYAIDASKI
GQELHWRAVESFDTGLQKTIKWYLSKYKKNTV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcttgttacagggggtgctggttttataggcagtaattttataccttatttt
ctagacaaaaatccgaataccacagtcattaatttggacaaattaacgtatgcaggagat
ttgaacaatcttgatgaagtatctcaaaccaaccgatatcggttcgtacagggagatatt
tgtaaccaaacccttattgattctattttcacaacacacaaaatcgattctgtgatacat
tttgcggcagagtcgcacgtagataaatccatttcaaaccctgatagtttcataaaaaca
aatatcgagggcacgtatactctattggaggccgcaagaaaacactggggagaaaataat
cagagcaatcgttttcatcatatatctacagacgaagtttacggtagtcttggagattca
gggtttttcaatgaaaaaactccctatgcgcccaatagtccatatagcgcatccaaagca
gcttctgattttttagtgaggagttattaccatactttcaaacttaatacgattaccacc
aattgttccaacaattacggccctaaacagcatgatgaaaaattaatacctacgataatc
aggacggccttgcaagggagtacaatccctatatacggtaaaggaaccaatgttcgggac
tggctttatgtattggaccactgcaaaggaatcgatactgtgtttaaaaaaggtaggccg
ggcgagacttatttgatcggcggtaataatgaatcgacaaatctaagtatcgcggagaaa
atatgttctattttggatgagcttttaccgaaggccaaaggtagttacaaagatcaaata
gcctttgtggaagacagaaaagggcatgaccacagatatgctatcgatgcgtcaaagata
ggtcaagaactacattggagggcagtagagagttttgatacaggtctgcagaaaaccata
aaatggtatttgtctaaatacaaaaaaaataccgtatga
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