Costertonia aggregata: HYG79_09710
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Entry
HYG79_09710 CDS
T06693
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cagg
Costertonia aggregata
Brite
KEGG Orthology (KO) [BR:
cagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cagg03019
]
HYG79_09710
03009 Ribosome biogenesis [BR:
cagg03009
]
HYG79_09710
Messenger RNA biogenesis [BR:
cagg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HYG79_09710
Ribosome biogenesis [BR:
cagg03009
]
Prokaryotic type
rRNA processing factors
HYG79_09710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF6305
Motif
Other DBs
NCBI-ProteinID:
QLG45611
UniProt:
A0A7H9AQ60
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All DBs
Position
complement(2116563..2118110)
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AA seq
515 aa
AA seq
DB search
MNRELIVRSSSEAVDFALLKDGKLIELHKEEDNNNFSVGDIFLAKIRKPVTGLNAAFVNV
GYEKDAFLHYHDLGPQLSSMLKFIKQVSTGKLRDYSLKDFPFEKDIDKHGVITDVIKANQ
SLLVQIVKEPISTKGPRISSELSLAGRYLVMVPFSDRVSVSQKIESNEEKDRLKRLVKSI
KPKGFGVIIRTVAEGKKVAELDKDLQNLLTKWSAMCKKLYKAPTPSKVLVELNRASSILR
DVFNDSFTGIHVDDETLYEQIKDYVAEIAPEKESIVKQHNSTVPIFEKFGIERQIKTSFG
RTASMSKGAYLIIEHTEALHVIDVNSGNRSNKAKNQEDTALEVNLLAASEIARQLRLRDM
GGIIVVDFIDMVKAPHRKKLFEHLRDEMKDDRAKHKILPPSKFGLIQITRQRVRPEMNIK
TSEVNPNGNGQEIEAPIVLIDKINANLEKLLKGPKANNGIVLNIHPFIAAYITKGFPSIR
SKWFLEHKKWIKIQPRDAYTYLEYRFKDKDGKTIY
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagagaattaatcgtaagatctagttccgaagccgttgactttgccttattaaaa
gatggaaagctaatagaattacacaaagaagaggataacaataatttttcggttggcgat
atattcctcgccaagattcgaaaacccgtaaccgggctgaatgccgcttttgtaaacgta
ggttatgaaaaagatgcctttttgcactatcatgatcttgggccgcagttatcttcaatg
ctaaaattcattaagcaggtaagtacagggaaattaagagattactcccttaaagacttt
ccatttgaaaaagatattgataaacatggtgtaataaccgatgttatcaaagccaatcaa
tctttattggtgcaaatcgttaaagaacccatatccaccaaaggcccccgaattagttcg
gaactctccctagcggggcgttacctggtcatggtacctttttccgatcgtgtatcggtc
tctcaaaaaatagagagcaacgaggaaaaagatagacttaaaagacttgtaaagagcatt
aagccaaaaggatttggggttatcatacgaacagttgcagaaggcaaaaaagtcgcagag
ctggacaaagatctacagaacttgctgaccaaatggtccgcaatgtgcaagaaattgtat
aaagcacctacgccatccaaggtattggtagagctcaacagggcttcatccatactgagg
gatgtttttaacgattcctttacgggaatccacgtagatgatgaaacgctttatgaacaa
attaaggattatgttgccgaaatagccccggaaaaggagtctatcgtaaaacaacataat
agtactgtcccgatttttgaaaaattcggaatcgagaggcagataaaaacttcttttggc
cgtacggcatccatgagcaagggtgcgtatttgatcattgaacataccgaagccttgcac
gtaatagacgtaaacagcggtaaccgttcaaataaggccaaaaatcaagaagataccgca
ttggaagtaaatcttttggccgcatcggaaattgcaagacaattaaggttgcgtgatatg
ggaggtattatcgtggtcgattttatagacatggtaaaagcaccgcacaggaaaaagctt
tttgaacatcttagggatgagatgaaagatgaccgtgccaagcacaagatactcccccca
agtaaatttgggctcatacagattaccagacaacgggtaaggccagagatgaacattaaa
acaagtgaggtaaatcccaatggcaatggccaggagatagaggcacctatcgttttaatc
gataagatcaatgccaatctggagaaacttttaaaagggcccaaagccaataatgggatt
gtattgaacatacacccttttatagcggcctatattaccaaaggtttcccgtccatacgt
tccaagtggttcttggagcataaaaaatggataaaaatacaacctagggatgcgtatacg
tatcttgaataccgttttaaggataaagacggcaagaccatatattag
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