Costertonia aggregata: HYG79_10845
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Entry
HYG79_10845 CDS
T06693
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cagg
Costertonia aggregata
Brite
KEGG Orthology (KO) [BR:
cagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cagg03032
]
HYG79_10845 (topA)
03400 DNA repair and recombination proteins [BR:
cagg03400
]
HYG79_10845 (topA)
Enzymes [BR:
cagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYG79_10845 (topA)
DNA replication proteins [BR:
cagg03032
]
Prokaryotic type
DNA Topoisomerases
HYG79_10845 (topA)
DNA repair and recombination proteins [BR:
cagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYG79_10845 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QLG45825
UniProt:
A0A7H9ARG7
LinkDB
All DBs
Position
2375616..2378120
Genome browser
AA seq
834 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKEYKVESSFGHIADLPSKELGVDVDNDFKPKYIVDNEK
KALVKKLKDLAKKAETIWLASDEDREGEAISWHLAEELGLDKDKTKRIVFNSITKSAIQK
AIDNPREINYNLVNAQQARRVLDRLVGYQLSPVLWKKIKPGLSAGRVQSVAVRLIVERER
DIEGFAPEASFKISAEFKTLAGSVFTAKMNKTFSSKEKAEAFLKQNIGADFSVGNLDKKP
AKKSPSAPFTTSTLQQEASRKLYFSVGRTMQVAQRLYEAGLITYMRTDSVNLSGEAINAA
KDAIISNYGEEYSNVRNFKGKSKGAQEAHEAIRPTDIKNQSPSLERDQSKLYELIWKRTI
ASQMSDAQLERTNVKIKSNTHAEEFTANGEVIKFDGFLKVYMEGFDDEDAAEEQEGMLPA
MKVGETLENKYITATERFSRPPYRYTEASLVKKLEELGIGRPSTYAPTISTIQNRGYVEK
GTVDGTERKYVQLLLESDNLKEKNLTETVGSDKGKLVPTDIGMIVNDFLVSNFSNILDYN
FTAKVEEDFDEIAEGQEDWQKVMKDFYKDFHPTVKDVEENADRASGERILGKDPKTGKQV
SVRLGRFGPMVQIGTVDDEEKPSFASLLPDQSLNTITYEEAMDLFKLPRKLGVYEGEEVE
ANVGRFGPYVRFGKKFVSMEKEDNAMEITMDRAVELIKAKQKADAPIAQYEGKDVQKGTG
RFGPFIKWDGMFINVNKKYDFDNLSQSDIEELIEIKKQKEIDKLIQEWPEEGIRIEKARW
GRHNIIKGKIKVELAKTVDATKISLEEAQTLIEKKTPKKKARAKAKAKPKAKKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaatttagtgattgtagagtcccccgcaaaggcaaagaccatagaaaaattt
ctaggaaaagagtataaggtagagtccagttttgggcatattgccgaccttccttccaaa
gaactgggtgtagatgtcgacaatgattttaaaccaaaatacattgtggataacgagaaa
aaggcactcgttaaaaaactgaaggatttggccaaaaaagcggaaaccatatggctggcc
agtgatgaggaccgagaaggagaggcgatttcctggcatttggccgaggaattgggattg
gacaaggacaagaccaagcgtatcgtctttaactctatcaccaaatcggccatacaaaag
gccattgacaatccacgtgagataaattacaatttggtaaacgcccaacaggcccggcgc
gttttggatagattggtagggtatcagctttcccctgtactttggaaaaaaataaaacca
ggactttccgctggcagggtgcagtcggtcgcagtaagattgatcgttgagcgggaacgt
gatattgaaggttttgccccagaggcatcttttaagatatcggccgagttcaagaccttg
gccggtagtgtttttactgcaaaaatgaataagaccttttcttcaaaagaaaaggcggaa
gcatttttaaagcaaaatatcggagcggatttttcagtcgggaatctggacaaaaagcct
gcaaaaaaatcgccatcagcaccctttacgacatctaccttacaacaagaggcgtcaaga
aaactatatttttcggttggtcgtaccatgcaagtggcccagcgtttgtacgaagcaggt
ttgattacttatatgaggaccgatagcgtaaatctatcgggcgaagccattaatgcggcc
aaagacgcaatcatatcaaattacggagaagaatatagtaacgttcgcaatttcaagggc
aaatccaaaggggcgcaggaagcccatgaggccattcgcccgaccgatatcaaaaaccag
tcgccatcactggaacgggaccaatcaaaattatacgaacttatctggaaacgaactatc
gcttcgcaaatgagcgatgcacaattagagcgtaccaatgtaaaaattaagagcaatacc
catgccgaagagtttacggcaaatggtgaggtcattaaattcgacggctttttaaaagta
tatatggaagggtttgatgatgaggatgctgctgaggagcaagaaggtatgttgcccgcc
atgaaggttggtgagaccttggagaataaatacattacggcgaccgaacggttttcaaga
ccaccatacagatataccgaagcatctttggtaaaaaaactggaggagctggggatcggc
cgtccatcaacctatgcgccaacaatctctaccattcagaacaggggctatgtagaaaag
ggtaccgttgatggtacggaaagaaagtatgtgcaattgcttttggaatccgataactta
aaggaaaagaacttgaccgaaactgtaggctcggacaagggtaaattagtgccaacagac
ataggaatgatcgtcaacgattttttggtcagtaatttttccaatatactggattataat
tttacggcgaaagtagaagaggattttgatgaaattgcagaaggtcaggaagattggcaa
aaggtgatgaaagacttctacaaagattttcatcctacagtaaaagatgttgaagaaaat
gccgatcgcgccagcggcgaacgtattctgggaaaagaccccaaaacagggaaacaggtt
tccgttcgtttgggcagatttgggcctatggtgcaaataggtaccgttgatgatgaggaa
aagccaagttttgcaagtctattgccagatcagtccttaaacacaattacttatgaagaa
gcgatggacctttttaaactacctagaaaattaggggtgtacgaaggtgaagaggtcgag
gccaatgtggggcgatttgggccctatgtacgttttggaaagaaattcgtgtcaatggaa
aaagaagacaatgccatggaaattactatggatagggctgtggaactgataaaggcaaag
caaaaagcagatgcacctattgcccagtacgagggtaaggacgttcaaaaaggtacgggg
cgctttgggccttttataaagtgggacggcatgttcataaacgtgaacaaaaagtatgat
tttgataatttgtcccaatcggatatcgaggaattgatagaaataaaaaagcaaaaagag
atagataagcttatacaagaatggcctgaagagggcattcgaatagaaaaggcacgatgg
ggaaggcataacattatcaaaggaaaaataaaggtagagttggccaaaaccgttgatgct
accaaaatttcattggaggaggcgcaaacgctgatcgagaaaaaaactccaaagaagaaa
gcaagagctaaggccaaggcgaaacctaaagcaaagaaaaaataa
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