Costertonia aggregata: HYG79_12730
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Entry
HYG79_12730 CDS
T06693
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cagg
Costertonia aggregata
Brite
KEGG Orthology (KO) [BR:
cagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cagg03032
]
HYG79_12730 (gyrB)
03400 DNA repair and recombination proteins [BR:
cagg03400
]
HYG79_12730 (gyrB)
Enzymes [BR:
cagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HYG79_12730 (gyrB)
DNA replication proteins [BR:
cagg03032
]
Prokaryotic type
DNA Topoisomerases
HYG79_12730 (gyrB)
DNA repair and recombination proteins [BR:
cagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYG79_12730 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QLG47281
UniProt:
A0A7H9AUW5
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All DBs
Position
2765492..2767435
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AA seq
647 aa
AA seq
DB search
MIGDNKRAYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMGGHCD
TISVTINEDNSITTKDNGRGIPVDLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLHG
VGVSCVNALSNHLRATVHRDGKIWEQEYERGKALYPVKQIGETKERGTIVTFHPDETIFT
QTIEFSYETLSNRMRELSFLNKGITITITDKRQKDKDSESGFVSETFHSTEGLKEFVRFL
DGTRESLIQSVISMEGEKNDIPVEVAMIYNTSYTENLHSYVNNINTHEGGTHLSGFRRGL
TSTLKKYADASGMLDKLKFEVQGDDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVSSAV
SQAVSEMLTNYLEENPDDAKVIVQKVILAAQARHAATKAREMVQRKTVMSIGGLPGKLSD
CSEQDPALCEVFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMQHRVFENEEIKN
IYTALGVTIGTEEDSKALNLEKLRYHKVVIMCDADVDGSHIETLILTFFFRYMRELIDGG
HVYIATPPLYLVKKGQKKRYAWSDKERDEIAESFNGSVGIQRYKGLGEMNAEQLWDTTMN
PEYRTLRQITIDNATESDRIFSMLMGDEVPPRREFIEKNAVYANIDV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
ttgataggggataacaaaagagcatattcagcagatagtatccaagctttggagggtatg
gagcatgttagaatgcgaccctccatgtacataggtgatgttggggtacgcggtttgcac
catttggtctatgaagtggtagataactctattgatgaggccatgggcggccactgtgat
accataagtgttacgattaatgaggataactctatcaccactaaagataacggtaggggc
atacctgttgatttgcataaaaaagagggtgtctcggccctagaagtagtcatgaccaaa
atcggtgccggtggtaagtttgacaaggactcctacaaggtttcaggtggacttcatggt
gttggggtttcctgtgtgaatgcactatcaaatcacctacgcgcaacagtacatcgggac
ggtaaaatttgggaacaggaatatgaaaggggaaaggccctatatccggtaaagcaaata
ggtgagaccaaagaaaggggtaccatcgtaacctttcatccggatgaaacgatttttacc
caaaccatagagttcagttacgaaactttatccaatagaatgcgtgagctttcttttttg
aacaaggggattaccattactattaccgataaacgccaaaaagataaggatagcgagtcc
ggttttgtttcggagacttttcattctaccgaaggtttaaaagaatttgttcggtttttg
gacggaacacgggagtctttgatacagagtgtcatttcaatggaaggagagaaaaacgat
attccggtcgaggttgccatgatatacaataccagttataccgagaaccttcattcttat
gtgaacaatatcaatacacatgaaggcggcacacatttatcaggttttagaaggggactt
acctctaccttaaagaaatatgccgatgcttcgggaatgctcgataaactaaagttcgaa
gttcaaggggacgattttagggaaggtcttacggccattgtatccgtaaaagtggctgaa
ccccaatttgaaggacagaccaagacaaagttgggcaatagggaggtttcctcggcagta
agtcaagctgtttctgaaatgttgaccaactatttggaagaaaaccccgatgatgccaaa
gtaatcgtacaaaaagtgattcttgcggcacaagctaggcacgcagctaccaaggcccgt
gagatggtgcagcgtaaaacggtaatgagtattggtggtttaccgggaaaactatcggat
tgttccgaacaagatcccgcactttgtgaggtgtttttggttgagggagattcggcaggt
ggtaccgccaaacaaggtagggataggaattttcaagccatactaccgttacggggtaag
atattgaatgttgaaaaggccatgcaacatagggtttttgagaatgaggaaatcaagaat
atttataccgcacttggcgttacgataggaacggaagaggatagcaaagccctcaacctg
gaaaaattgcgttaccacaaagtggtcattatgtgtgatgctgacgtggatggtagccat
atcgagactttgatactcacgttctttttccgttatatgcgggaactcatagatggcggt
cacgtgtacatagctacgccacctttgtatttggttaaaaaaggacaaaagaaaagatat
gcgtggagcgataaggagcgtgatgaaattgccgaaagttttaacggtagtgtaggtata
caacgttacaaaggtcttggtgagatgaacgccgagcaattatgggatacgaccatgaat
cccgaatacaggactttaaggcagataaccattgataacgctacggaatcagatcgtatt
ttttctatgttgatgggcgatgaagtaccaccaaggagggaatttatagagaagaatgcc
gtatatgccaatatagacgtttaa
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