KEGG   Costertonia aggregata: HYG79_13890
Entry
HYG79_13890       CDS       T06693                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cagg  Costertonia aggregata
Pathway
cagg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cagg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HYG79_13890 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cagg03019]
    HYG79_13890 (rny)
Messenger RNA biogenesis [BR:cagg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HYG79_13890 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 KH-I_KHDC4-BBP ERM_C
Other DBs
NCBI-ProteinID: QLG46392
UniProt: A0A7H9ASS0
LinkDB
Position
3019847..3021418
AA seq 523 aa
MDTTTIIIITAIVGLIIGFIIAKFLEKGKASKTIASAKKEAASIVKDAKAEGESIKKDKI
FQAKEKFLELKAEHEKVIINKDKKIAEAEKRTRDKESQISGELAKNKKLNEQLDSKLKEV
EHKSEFLEKKQSELDKLHKSQVQQLEVISGLSADEAKGQLLESLKDAAKSDAMAFMQTTM
EEAKLTAQQDARKIIINTIQRIGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRALESA
TGVEIIVDDTPEAIILSCFDSVRREVARLSLHKLVTDGRIHPARIEEIVKKTEKQIEQEI
VEVGKRTVIDLGIHGLHPELIRAVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNPK
LAKRAGLLHDIGKVPNTEAEVETPHAILGMQWAEKFGEKPDVCNAIGAHHDEIEMKNLIS
PIVQVCDAISGARPGARRQVLDSYIQRLKDLEEIAFGFGGVQKAYAIQAGRELRVIVESE
KVSDDKAAQLSFEISQKIQTDMTYPGQVKVTVIRETRAVNVAK
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggatactacaactataattatcataaccgcaatcgttggattgattatcggtttcatc
atcgcaaaattccttgagaaaggaaaggcatccaagacgatagcgtcggcaaaaaaggaa
gccgcatcaatagtaaaagacgcaaaagccgagggggagagtatcaaaaaggataaaatt
tttcaggccaaggaaaagtttttggagctaaaggcagagcatgaaaaagttatcatcaat
aaggataaaaaaattgccgaggccgaaaagcgaacaagggacaaagaatcccaaataagc
ggtgaactggccaaaaacaaaaaactcaacgaacaactagattcaaaattgaaagaggtt
gaacataaaagtgagtttttggaaaagaaacaatccgaacttgataaactgcacaaaagc
caagttcaacagttggaggttatttcggggctttcggccgatgaagccaaaggacagctt
ttagaatctttgaaagatgccgccaagtcagacgcaatggcctttatgcaaacaactatg
gaagaagccaaattaacggcccaacaagacgcaagaaaaattatcatcaataccattcaa
cgtataggaaccgaagaagccgtagaaaattgtgtatctgtattcaacattgaatcggac
gacgtaaaagggcgcatcatcggtagggaagggcgaaatattcgtgccttggaatccgct
accggcgttgagattattgttgacgacacccctgaagcaataatactgtcctgctttgat
tccgtcagaagggaagtggcccgtttatccttgcacaaactggttaccgatggccgtatc
catcccgcacgaatcgaagagatcgtaaagaagaccgaaaagcagatagagcaggaaatt
gttgaagtaggaaaaagaacggttattgatttgggtattcacggattgcacccagaattg
atacgggccgttggccgtatgaagtatcgttcctcatacggacaaaacctattgcaacac
tctagagaagtcgccaagctttgtggggttatggcagccgaactgggactcaacccaaaa
ttggccaagcgtgccggacttttgcacgatataggcaaagtacccaataccgaagctgaa
gttgagacgccccacgctatccttggtatgcaatgggccgagaaattcggtgaaaaaccg
gatgtttgcaatgccataggtgcacaccacgatgaaatagaaatgaaaaacctgatttca
cccatcgttcaagtttgcgatgccattagcggggcaagacccggcgcacgaagacaggtg
ttggattcttacattcaacgtctaaaagatttggaagaaatcgcatttgggttcggcggg
gtgcaaaaagcctatgcgatacaagcaggtagggaactacgtgtaatcgtggaaagcgaa
aaagtgagcgacgacaaagcggcacaactgtcttttgagatatcacaaaaaatacagacc
gatatgacctatccagggcaggttaaggtcacggtcattcgtgagacacgtgccgtgaat
gtggcaaaataa

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