Costertonia aggregata: HYG79_16465
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Entry
HYG79_16465 CDS
T06693
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cagg
Costertonia aggregata
Pathway
cagg03420
Nucleotide excision repair
cagg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYG79_16465
03430 Mismatch repair
HYG79_16465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cagg03400
]
HYG79_16465
Enzymes [BR:
cagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYG79_16465
DNA repair and recombination proteins [BR:
cagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYG79_16465
MMR (mismatch excision repair)
Other MMR factors
HYG79_16465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QLG46879
UniProt:
A0A7H9ATV5
LinkDB
All DBs
Position
3590763..3593090
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AA seq
775 aa
AA seq
DB search
MENFIDELNDAQKAPVLHKDGPLMVIAGAGSGKTRVLTYRIAHLMAQGVDSFNILALTFT
NKAAREMKKRIADIVGNSEAKNLWMGTFHSVFAKLLRFDGDKLGYPSNFTIYDTQDSQRL
IASIIKEMGLDKDIYKYKQIQNRISSYKNSLITVKAYHQNPELMEADAMAKRPRMGDIYQ
NYVDRCFKAGAMDFDDLLLRTNELLNRFPEVLAKYQHRFRYILVDEYQDTNHSQYLIVKA
LADRYQNICVVGDDAQSIYSFRGANISNILNFQRDYDNVGMYRLEQNYRSTKNIVNAANS
IIAKNKNQLEKVVWTANDEGAAIKIHRSPTDAEEGRYVANSIWDNKMQHQLSNGEFAILY
RTNSQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLSYLRLVINPKDEEALKRVINFP
ARGIGQTTVDKMVVAANHYGRSIFEIIENLDKIDLKINSGTKRKLQDFATMIKSFQIMSE
STDAFTLAEHVAKKTGILLEFKKDGTPEGIGRMENIEELLNGIQDFVEGQKELADATGSI
SEFLEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQNRYRWGKLIDAEPSRFLEEIDEQYVENLTPVDGGY
RYKPLMDTDIFGEVDKSTLRQNKPVSGTPPSVRKPNENQLKKLRKLKPELATPVGNTNTI
DPNLAEGSLVNHTRFGRGKVLKIEGVGNDKKAEIQFEKGDVKKLLLRFAKLEVVG
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
ttggagaattttatagatgaattgaacgatgcccaaaaagctcctgtactccataaggat
ggtcctttgatggtcatagctggtgcaggctcgggaaagaccagggtgttgacgtaccgt
attgcccatttgatggcgcagggcgtagattccttcaatatcctggcattgacctttacc
aacaaagcggcacgtgaaatgaaaaagcgtatcgccgatattgtagggaattcggaggcc
aaaaatctttggatgggaacgtttcattccgtttttgccaaactcctgcgttttgatggg
gataaattaggttatcccagcaatttcaccatttatgatacacaggattcccaaaggttg
atagcatcgattatcaaggaaatggggttggacaaggatatctataaatacaaacagata
cagaaccggatttcatcctacaaaaacagtttgattaccgtaaaggcctaccaccagaac
ccggaactcatggaggccgatgccatggccaaacggccgagaatgggggatatttaccaa
aattacgtagaccgttgcttcaaagcgggtgctatggattttgacgatctgctgctacgc
acaaacgagcttttgaaccgattccccgaggtattggccaaatatcaacataggttccga
tatattttggtcgatgagtaccaagataccaaccattcgcagtaccttattgtaaaggcc
ttggcagacaggtatcaaaatatatgtgtggttggtgacgatgcccaaagtatatactct
tttcgaggggccaatatcagtaatatcctaaattttcaaagggattatgataatgtcggc
atgtatcgtttggagcaaaattacagatctaccaagaatattgtaaatgcggccaattct
atcatcgctaagaataaaaaccagttggaaaaagtagtttggacagcgaacgacgaaggt
gcggccattaaaatacaccgaagcccaaccgatgcggaagagggcaggtacgtagcaaat
tccatttgggacaataaaatgcagcatcagctctcgaacggggagtttgcgatattatac
cgtaccaactcgcagtcccgagctatggaggatgccctgcgcaaaaaggatattccgtac
cgtatctatggtgggctctccttttatcaacgtaaggaaatcaaggatgtgctctcctat
ctgcgcttggtcatcaaccccaaggatgaggaggcgttaaagcgtgtcatcaacttcccc
gcaaggggcataggccaaacaacggtagataaaatggtcgttgccgccaaccattacggg
cgttccattttcgaaatcatcgaaaatctggataagatagatttaaagataaattccggt
accaaaagaaaattgcaggactttgccaccatgataaaaagtttccagatcatgagcgaa
agtaccgatgcttttacgcttgcggaacatgtagccaaaaagaccggtattttgctggaa
ttcaaaaaggatggcacccctgagggtattggccgaatggagaatattgaggaattgctc
aatggtattcaagattttgtggaaggacaaaaagaactcgctgatgccacgggaagtatt
tcggaatttttggaggatgttgccctagcgaccgatttggataaagacaccggcgatgat
gatcgtgtggccctaatgaccattcatttggcgaaggggctggaatttccgtatgtctac
attgttggtatggaagaggatttgttcccgtcagctatgagcatgaacacacgcagtgag
ctagaagaagaacgccgtttgttctatgtcgcattgaccagggccgaaaaacaggcctat
ttgacctacacgcaaaatagataccgctggggaaaacttattgacgccgaacctagtcgg
tttttagaggaaatcgatgaacaatatgtggagaacctaactcccgtagatggtggttat
cggtacaaaccattaatggatacggatatttttggtgaagtggacaaaagtaccttgcgc
caaaataaaccggtcagcggtacaccgccaagtgttcgtaaacccaatgaaaatcagctc
aaaaaattacggaaattaaaaccggaactagccaccccggtcgggaacaccaatacaata
gaccccaaccttgcggaaggaagtctcgtgaaccatacccgttttggtcgtggaaaggtg
cttaaaatcgaaggagtcggtaacgataaaaaggccgaaatacagtttgaaaaaggagat
gtcaaaaaattgttgctgaggttcgcaaagttagaggtggttggttaa
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