Clostridium autoethanogenum: CAETHG_0292
Help
Entry
CAETHG_0292 CDS
T02883
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cah
Clostridium autoethanogenum
Pathway
cah03420
Nucleotide excision repair
cah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAETHG_0292
03430 Mismatch repair
CAETHG_0292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cah03400
]
CAETHG_0292
Enzymes [BR:
cah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAETHG_0292
DNA repair and recombination proteins [BR:
cah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAETHG_0292
MMR (mismatch excision repair)
Other MMR factors
CAETHG_0292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
DEAD
PhoH
AAA_30
SLFN-g3_helicase
ResIII
NACHT
CbiA
Motif
Other DBs
NCBI-ProteinID:
AGY74523
LinkDB
All DBs
Position
complement(309479..311776)
Genome browser
AA seq
765 aa
AA seq
DB search
MAISVMNMENEKEHLEETLNWIDIQIKNVNSEDEKLKIIIDGLRKQSRGKYNEELETKEK
LYNITHKNLEKYMESKNKPYFGRVDFREYKGEEETFYIGKFGLGDMEKGDEKVIDWRAPL
ADLYYSGVSGETFYRSPQGIINGELNLKRKFLIEDGKLKDAFDEGINEIILQSADENENV
LVDEFLKINLEQSANSKLKDVVATIQKEQNNIIRTEKNISLIVQGSAGSGKTTVALHRLA
YLLYRYKGKIQGEDIVVVAPNKLFLNYISDVLPNLGIEKVKQVTFEKMCCQMLNLKSKVY
TKDKKLSSIIESKKYSGVENTLESSRVRGSILYKNLIDRYIEYIEERDVNIDDIKIDNYI
LFNKEEICRLYSSDMKHLPINNRKHEIKRYFLLKIDDKINKIMDKIDFYYEYMIARLKKS
MEDGPDRRKTLTSVYDERDKKKKDTKNRAIQAFECYFNRWSEIDTENLYEEFLNDKEVFD
RIIKGNISKNIWNNIKEEVKENREKKVIDGDDLAPLCYLKFKIEGVSKKFKYKHIVVDEA
QDYSAFQMTILKEISINDSMTIVGDLGQGIYYYKGITNWKDLIEDVFDSNAKYTQLEHSY
RSTMEIIKFANKILKLQKNNLKPAVPVLRHGKVPQVIEFKNNREFGDALDRIVEEVYTAG
KKSIAVIGKTYDQCKKIREYLKKYSSYSWSLVRENDNNLNFENIIIPSYMTKGLEFDCSV
IYNCSEENYGENELDRKILYVVLTRALHMEYIFYSGKKSKLIKNV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggctataagtgttatgaatatggaaaatgaaaaagaacatttagaagaaaccttgaat
tggatagatattcagattaaaaacgtaaattcggaagatgaaaagttaaaaataattata
gatggacttagaaaacaatctagaggcaaatataatgaagaattagaaacaaaagaaaag
ctatataatataactcataagaatcttgaaaaatatatggaaagtaagaataagccttat
tttggaagagtagattttagagaatacaagggagaagaagagactttctatataggaaaa
tttggactgggagatatggaaaagggcgatgaaaaggtaattgactggagggctcctcta
gcagatctttattatagtggagtttcaggagaaactttttatagatctcctcaaggtata
ataaatggagaacttaatttaaagagaaaattcttgattgaagatggaaaattaaaggat
gcttttgatgaaggaataaatgaaataatactccagtctgcagatgaaaatgaaaatgtc
ctagtagatgaatttttaaaaataaatttggaacaaagtgcaaatagcaaacttaaggat
gtagttgctaccatacaaaaggagcaaaacaatataataagaactgaaaaaaatatttca
cttatagttcaaggatctgcaggttctggaaaaactacagtagcacttcataggcttgcc
tacctactttatagatataaaggtaaaattcaaggggaagatattgtagttgtagcccct
aataaattgtttttaaattatatttcagatgtacttccaaatttaggcatagaaaaagtc
aaacaggtaacctttgaaaaaatgtgctgccagatgttgaatttaaaaagcaaagtttat
accaaagataaaaagctgtccagcataatagaaagtaaaaaatacagtggtgtagaaaac
acacttgaatccagtcgcgttaggggaagcattttatataaaaatttaattgataggtat
atagaatatatagaagaaagagatgtaaatattgatgatataaagatagataattatatt
ctgttcaataaagaagaaatatgtagattgtattcaagtgatatgaaacatctgcctata
aataataggaagcatgagataaagaggtattttctgctgaagatagatgataagataaat
aaaataatggacaaaatagatttttattatgaatatatgattgcaagactaaagaaaagt
atggaggatggtccagataggagaaagacactcacaagtgtatacgatgaaagagataaa
aagaagaaagacactaaaaatagggcaatacaggcttttgaatgttattttaatagatgg
agtgaaattgatacagaaaatctttatgaagagtttttaaatgacaaagaagtatttgat
agaattataaagggaaatatttcgaagaacatatggaataatataaaagaggaagtaaag
gaaaatagagaaaaaaaagtaatagatggtgatgatttggctcctctttgctacttgaaa
tttaaaatagaaggagtttctaaaaagtttaaatataagcacattgtagtggatgaggcg
caggattatagtgcttttcagatgaccattttaaaagaaattagcataaatgattccatg
actatagtcggagatttaggacagggtatatactattataagggaataactaattggaaa
gatttaatagaagatgtatttgattctaatgcaaaatatactcaacttgaacacagttat
cgttctacaatggaaataataaaatttgcaaataagattcttaagcttcagaaaaacaat
ctaaaacctgcagtaccagtgcttagacatggcaaagtaccacaagtaatagaatttaaa
aacaatagagaatttggtgatgctttagataggattgtagaggaagtgtacactgcaggc
aagaaaagcatagctgttataggtaaaacctatgatcagtgtaagaaaatcagagagtat
ttaaaaaagtacagttcttatagttggagtctggtaagggaaaatgacaataatttaaat
tttgaaaacataataattccatcttatatgacaaagggattagagtttgactgcagtgta
atttataattgcagcgaagaaaattatggtgaaaatgaacttgatagaaagatattatat
gtagttcttacaagggcacttcatatggaatatatattttattcaggtaaaaagtctaaa
ctcattaagaatgtttag
DBGET
integrated database retrieval system
