Clostridium autoethanogenum: CAETHG_0838
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Entry
CAETHG_0838 CDS
T02883
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cah
Clostridium autoethanogenum
Pathway
cah03420
Nucleotide excision repair
cah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAETHG_0838
03430 Mismatch repair
CAETHG_0838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cah03400
]
CAETHG_0838
Enzymes [BR:
cah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAETHG_0838
DNA repair and recombination proteins [BR:
cah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAETHG_0838
MMR (mismatch excision repair)
Other MMR factors
CAETHG_0838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_25
AAA_11
DEAD
ResIII
Iron_traffic
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGY75065
LinkDB
All DBs
Position
complement(902555..904756)
Genome browser
AA seq
733 aa
AA seq
DB search
MKFRDDQLPIMQYKGGTMAVSAVPGAGKTFITAQLVCKIIEEKLNKPGKVLVVTYMNSAV
NNFKNRISHMLEERGIDSNSDYEVMTIHGLAMKVLQERPDAAGLDENFKVIDDLQKIFYL
DNAVKIWRKLGGEKIYRSLLSEYGTKKYDEKSERWWKDFLQISDVLISELKLNGITPEKV
EENRELLGNNSIIYILNYIYFRYEKMLNLNGYVDYNDILVLAYKALISDEDLRKKFQQKY
SFVFEDECQDSNLVQCDILSIISERVGADNKKRECNLVRVGDLNQSIMGSFTSSNPIYFK
QFLREADKNYVMNRAGRSTRNIMNLANSLVEYTVKNHPEKRCREALRYQKIHPIEDVEDL
KNPEVDEYGIYAYSMSSWEDVKKRTIEVVKSFKSKHSDMTLAILIPFNSHVKEIAEELRK
NKIECDELSSTSSERLKIINILGKILGFLGEPDSPVKFRDLMYEIIEGDNEKKNVIINNI
TSFKIEDIIKESVFKTTSVCKLEEIDKNIFEDFICKLRMVKDILANLNMPLQELILYIGY
ELKLNNEDKAILQYVASYVRHKNAENNSMTLDEISQELLDVRSSAFTHICNVIYDIRGYE
PVPEKVTVTTYHKSKGLEWDCVFLLYLNNYIYPYSIKGKFRSEHYYFKDEFKNPTAIGKA
EVQKLLQNDVCYNPIIKAREEVICEKIRLLYVAITRAKKYLILMAHYDENKKDCPSKYFE
IIKKFICENKQSS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagagatgatcagctgcctataatgcaatataaaggaggtactatggcagtt
tctgcagtgcctggggcagggaaaacctttattacagcacagcttgtttgcaaaataata
gaagaaaaattaaacaagcctggaaaagtacttgtagttacatacatgaatagtgctgta
aataactttaaaaatagaatttctcacatgcttgaggagagaggaatagattcaaatagc
gactatgaagttatgacaatacatggccttgcaatgaaagtattacaggagaggccggat
gcagcagggttagatgaaaattttaaggtcatagatgatttacagaagatcttctattta
gataatgctgtaaagatatggagaaagcttggaggagaaaagatatacagaagtctttta
agtgagtatggcactaaaaaatatgatgaaaaaagtgagagatggtggaaagatttttta
caaatatcagacgtgcttataagtgaattaaaattaaacggaataactcctgaaaaagta
gaagaaaacagagagcttttaggaaacaatagcataatttatattttaaattatatttat
ttcagatatgagaaaatgttgaatctaaatggatatgtggactataatgacatacttgta
cttgcttataaggcacttatttcagatgaggatttgagaaaaaagtttcaacaaaaatat
agttttgtatttgaagatgaatgtcaggattcaaatttggtgcagtgcgatatactgtcc
attatttctgaaagggtaggtgcagataataagaagagagaatgtaatttggttcgggta
ggagatttaaatcaaagtataatgggaagttttacatcttcaaatcccatatattttaaa
caattcttaagagaagcagataaaaactatgtaatgaacagagcaggcagaagcacaaga
aatataatgaatttagctaattctttagttgaatacaccgtaaaaaatcatccagagaaa
agatgtagagaggcacttagatatcaaaaaatacatcctatagaagatgtagaagatttg
aaaaatccagaagttgatgaatacggcatctatgcatacagcatgagttcttgggaagat
gtgaaaaaaaggactatagaagtggtaaaaagttttaaaagcaagcattcagatatgaca
cttgccatattgattccctttaacagccatgtaaaagaaatagcagaagagcttagaaaa
aataaaatagaatgtgatgaactgtcaagcacatcttcagagaggctcaaaatcataaat
attttggggaaaatattaggctttttaggagaaccggacagcccggtgaaatttagagat
ttgatgtatgaaattatagagggggacaatgaaaaaaagaatgttataattaataatatt
acaagttttaaaattgaggacataataaaagaaagtgtatttaagactacgtctgtttgt
aaattagaggagatagacaagaatatatttgaagattttatatgtaaattaagaatggta
aaagatatattggccaatttgaatatgcctttgcaagaattgattctatatataggttat
gaacttaaattaaataatgaagataaagctattcttcaatatgtagcatcttatgtaagg
cataagaatgctgaaaataattctatgactttggatgaaatttcacaggagcttttagat
gtaagaagttctgcatttacacatatatgcaatgtaatttatgacataagaggatatgag
ccagttccagagaaagtcacggttacaacttatcataaatcgaagggattagaatgggac
tgcgtatttttgttgtatttaaataattacatatatccctatagtattaagggaaaattt
agatcagaacactattactttaaagatgaatttaaaaatcccacagctataggaaaagca
gaagtgcaaaaactacttcaaaatgatgtttgctacaatcctattataaaggctagggaa
gaagtgatatgtgaaaaaatacgacttttgtatgtagctataaccagggcaaagaaatac
ttaatacttatggcccactatgatgaaaacaaaaaagattgcccatctaagtattttgaa
atcataaaaaagttcatttgtgagaataaacagagttcttag
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