Clostridium autoethanogenum: CAETHG_1450
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Entry
CAETHG_1450 CDS
T02883
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cah
Clostridium autoethanogenum
Pathway
cah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAETHG_1450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cah03019
]
CAETHG_1450
03009 Ribosome biogenesis [BR:
cah03009
]
CAETHG_1450
Enzymes [BR:
cah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CAETHG_1450
Messenger RNA biogenesis [BR:
cah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CAETHG_1450
Ribosome biogenesis [BR:
cah03009
]
Prokaryotic type
rRNA helicases
CAETHG_1450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
NDK
Motif
Other DBs
NCBI-ProteinID:
AGY75675
LinkDB
All DBs
Position
1553695..1555272
Genome browser
AA seq
525 aa
AA seq
DB search
MENINFSDLNLDPKVLQAIDDMGFEEPSQIQAESIPVILDGNDVIGQAQTGTGKTLAFGA
PMLSKITTKSKHISALIVTPTRELAIQVNDELSRIAKFKKVALLPIYGGQPIDRQIRSLK
RGMDVVVGTPGRILDHIKRKTLDLSNIEFLILDEADEMLDMGFIEDIENIIKATNSDRQT
LLFSATMPDQIKKLSSRYMKSNIKSIKIAKNTLTVDKTKQYYYEIKQKDRFESLCRILDV
DEPSSAIIFCKTKRGVDELVEGLQARGYNVEGMHGDMGQNQRLNTLRKFKEGSLEFLVAT
DVAARGIDVENVSHVINYDLPQDTESYVHRIGRTGRANKEGIAYSLVTPREYILLKQIEK
FTKSKIRRKEIPTVDDIYEAKYKNIEEQVKSIISEDNYKNFIPIATELDEEYNLVDVAAA
LMKIIFDKELSFDYKENSLTVDEKDVRLFLSIGRMDNLTPRKLLKFISETSSVEAYEIGD
IDILNKFTFINVPERVSSIILKKTNGKKLQGRRVSVEVAKSKKSH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatattaattttagtgatttaaatttagatcctaaggttcttcaagcaattgat
gatatgggatttgaagaaccatctcaaattcaagctgaatcaatccctgtaatactagat
gggaatgacgtaattggtcaggcacagacaggtacaggaaagaccttagcttttggagca
cctatgttaagcaagataactaccaaaagcaaacacatctcagctcttatagttactccc
acccgagaacttgcaattcaagtaaatgatgagttgtccagaattgctaaattcaaaaaa
gtagccctattacctatatacggtggtcaacctatagacaggcagattagatctttaaaa
agaggtatggatgtagtagtaggcacccctggaagaatacttgatcatataaagagaaaa
actttagatcttagcaatatagaatttttaatattagatgaagcagatgaaatgttggat
atgggttttatagaagatatagaaaacataataaaagctacaaattctgacagacagaca
ttacttttctctgctactatgccagatcagataaagaaattgtcttccaggtatatgaag
tcaaatattaagagtataaaaatagctaagaacacattgactgtagataaaacaaaacaa
tattactatgagataaaacaaaaagatagatttgaatctttatgtagaattctagacgta
gatgaaccttcaagtgccataatattttgcaaaaccaaacgtggtgtagatgaattagta
gaaggtttgcaggctagaggatacaatgtagaaggtatgcacggtgacatgggacagaac
cagagattaaatacccttagaaagtttaaagaaggttcccttgaattcttagttgccaca
gacgtagctgcaagaggtatagatgtggaaaatgtctcccacgttataaattatgacctt
ccacaggatacagaatcttatgttcatagaattggaagaaccggaagggcaaacaaagaa
ggtattgcctattctttagtaacacctagagaatacatacttttaaagcaaatagagaag
ttcaccaaaagtaagataagaaggaaggaaattcctacagtagatgatatctatgaagct
aagtataaaaatatagaggaacaagttaaaagcattatatctgaagacaattataaaaac
tttattcctatagcaactgaattagatgaagaatacaatctagtagacgtagcagctgct
cttatgaaaataatttttgacaaagaattgagctttgattataaggaaaattccttaact
gtagatgaaaaagatgttaggttattcctctcaataggtagaatggataatttaactcct
agaaaacttttaaaatttataagtgaaacttcttcagtcgaagcctatgaaataggtgat
atagatatactaaataaatttacatttataaatgtcccagaaagagtatcttctattata
ttgaaaaaaactaatggtaaaaaacttcagggaagaagagtttccgttgaagtggctaaa
agcaaaaaatctcattag
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