Clostridium autoethanogenum: CAETHG_1920
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Entry
CAETHG_1920 CDS
T02883
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cah
Clostridium autoethanogenum
Pathway
cah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAETHG_1920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cah03021
]
CAETHG_1920
03400 DNA repair and recombination proteins [BR:
cah03400
]
CAETHG_1920
Enzymes [BR:
cah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAETHG_1920
Transcription machinery [BR:
cah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAETHG_1920
DNA repair and recombination proteins [BR:
cah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAETHG_1920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AGY76139
LinkDB
All DBs
Position
complement(2064157..2065104)
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPKIECVETSEDGNYGKFVVEPLERGYGITLGNALRRILLSSLPGVAANHIKIDG
VLHEFSTIRGVKEDVAELILNIKELALKMNGEGPKTIYIDAQGPGEVVAGDIKTDGDVEI
INKDLHIATLDDDGKLYMEIAVNGGRGYVSQRKNKSEDMPIGTIPVDSIYTPIKRVNFAV
ENTRVGQITDYDKLSLEVWTNGTILPDEAVSLSAKILIEHFKLFMTLTDHANNVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERTMDDMMKVRNLGKKSLEEVE
QKLDALGLSLKQSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatagaaaaacccaaaatagaatgtgttgaaactagtgaagatggtaactat
ggaaagtttgtagtggagccccttgaaagaggctatggtattactcttggtaatgcactt
agaaggattcttctttcttcccttccaggagttgctgctaatcatataaaaatagatggt
gtacttcatgaattttcaactattcgtggagtaaaagaggatgttgcagagctaattcta
aatataaaagaattagctttaaagatgaatggagaaggtcctaaaactatatatatagat
gcacaaggaccaggagaagttgttgcaggagacataaaaacagatggtgatgttgaaata
attaataaagacttacatatagctaccttagatgatgatggcaaactctatatggagatt
gcagtcaacggaggaagaggatatgtttctcaaagaaagaataagtctgaagacatgcca
ataggtactattcctgtagattcaatatatactcctattaaaagagttaattttgctgta
gagaatacaagagttggtcaaataactgattatgataaattatcattagaagtatggact
aatggaactatattaccagatgaagctgtaagtttatcagctaaaattctcatagaacat
ttcaaactatttatgactcttactgatcatgctaataatgtagaaataatggttgaaaag
gaagaggataaaaaggaaaaagttcttgagatgacaatagaagaattagacctttcagtg
agaagttataattgtctaaagagggctggaataaatacagttcaagagttaacagaaaga
acaatggatgatatgatgaaggtaagaaatttaggtaaaaaatccttagaagaagttgag
caaaagcttgatgccttaggattatcattaaagcaaagtgaagaatag
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