Clostridium autoethanogenum: CAETHG_2258
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Entry
CAETHG_2258 CDS
T02883
Name
(GenBank) HDIG domain-containing protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cah
Clostridium autoethanogenum
Pathway
cah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAETHG_2258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cah03019
]
CAETHG_2258
Enzymes [BR:
cah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CAETHG_2258
Messenger RNA biogenesis [BR:
cah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CAETHG_2258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
DUF2555
RFC1
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AGY76469
LinkDB
All DBs
Position
2414945..2416336
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AA seq
463 aa
AA seq
DB search
MKDFIKSTREVISKVGGEVYLVGGYIRDRLISITAQPKDIDFIFNGNIEKFMEELENRQY
KFFPIKQEIGIYRCMLGNNSIDISLMEGDSIEEDLKKRDFTMNAIAIKLSGDKVKVIDPF
YGRRSIDNRIIKSVTDMSLENDPIRILRGIRFCISYGMHFNLDTEKCIEKLCYKIMDMPM
ERVFKEFMLILERDDYGKAFEVLDNYGILKNIIPYIEELKTIGKCAYHIEDVFTHMNLTY
CVFKDILNGKVSVKGLNLHVFQDKIGDFKLREYMSLACFLHDIGKYEAYRKDGDKVSFWG
HEMKGAAIARNFCRNMKFPKKAESYIENIVEGHMYPLKIFKQNSKDKKNDFYKFFSKYDG
YIIEILTAAYCDNYATRMLLDVENEKVRFKMFIEDMLKEYELYCSINENKILNGNDVIQI
LNISGPEVKNALEDVIRLRYLGKIQTREEALNYLRVKINNNYI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagactttattaaaagcacaagagaagtaataagtaaagtaggaggagaagtttat
ttagttggtgggtatataagagatagattaattagtataacagctcaaccaaaggatata
gattttatatttaacggaaatattgaaaaatttatggaggaactcgaaaatagacaatat
aaatttttccctataaagcaggaaataggtatatatagatgtatgctaggaaataattcg
atagatatatctctcatggagggggattctattgaggaggatttgaagaaaagagatttt
actatgaacgctatagctataaaacttagtggagataaagttaaagttattgatcccttt
tatggaagaagatctattgataatagaataattaaaagtgtaacggatatgagcttagaa
aatgatcccatcaggatacttagaggtattagattttgtatatcttatggaatgcatttt
aatttagatacggaaaaatgcattgaaaaattatgttacaaaataatggatatgcctatg
gaaagagtctttaaagaatttatgcttatattggaaagggatgattatggaaaggctttt
gaagttttagataactatggaatactaaaaaatattataccttatatagaagaattaaaa
actataggaaaatgtgcatatcatatagaagacgtatttactcatatgaatttaacttat
tgtgtatttaaggatatcttaaatggtaaggtaagtgttaagggattaaatttacatgtg
tttcaagataaaataggtgactttaagttgagagagtatatgtctttagcttgctttttg
catgatattggtaaatatgaggcttatagaaaggacggagacaaagtaagtttttgggga
catgaaatgaaaggagctgctatagctaggaatttctgtaggaacatgaaattcccaaaa
aaagcagaaagctatatagagaatatagtagagggccatatgtatccgctaaagattttt
aaacaaaattctaaagataagaagaatgatttttataagtttttttcaaaatatgatgga
tatataatagaaatactaactgctgcatattgtgataactatgctacaagaatgcttttg
gatgttgaaaatgagaaagttagatttaaaatgtttattgaagatatgctaaaagagtat
gaattatactgcagtataaacgagaataagattttaaatggaaatgatgttattcagatt
ttaaatatatcagggcctgaggtaaaaaatgctcttgaagatgtgataagacttagatat
ttaggaaaaatacaaactagagaagaagcattaaattatttaagagttaagataaataac
aattatatttaa
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