Clostridium autoethanogenum: CAETHG_2474
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Entry
CAETHG_2474 CDS
T02883
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cah
Clostridium autoethanogenum
Pathway
cah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAETHG_2474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cah03019
]
CAETHG_2474
03009 Ribosome biogenesis [BR:
cah03009
]
CAETHG_2474
Enzymes [BR:
cah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CAETHG_2474
Messenger RNA biogenesis [BR:
cah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CAETHG_2474
Ribosome biogenesis [BR:
cah03009
]
Prokaryotic type
rRNA helicases
CAETHG_2474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
SWI2_SNF2
AAA_30
Cdh1_DBD_1
Flavi_DEAD
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AGY76683
UniProt:
A0ABN4BKZ6
LinkDB
All DBs
Position
complement(2650321..2651766)
Genome browser
AA seq
481 aa
AA seq
DB search
MDKLEFKDFALSEDILKSIEKLGYKNPSQVQEKVIPLIFKNKDIIVKSQTGSGKTAAFAI
PICEKIELEEKNSQVLVLAPTRELALQIKEDFYDIGRFKRINCTAIFGKEPITTQIKELK
QRTHVIVGTPGRTLDHIEKGTLSLKKIQYLIIDEADEMLNMGFIDQVKAVLDKLPKNRVT
LLFSATIPQEILKLCAAYMNNPINVEIDAEDPVINRINQIYYQIEAYKKFDLLNKLVYTQ
RPESSMIFCRTKKNVEDLVLQMKGKGYSCSGLHGGMLQSERIDVMKRFKRGEFIFLVCTD
VAARGIDVENITHIINYDIPMEKESYVHRIGRTGRAGKSGTAITFVTPKEYRFLEEIEKF
FNLTIEKGTIPSKEEVEKGKDIYKEKLKAAPKIKKDKSTKLNKDITKIYISAGKKKKIRP
GDIAGTISSIDGINPEDVGIIEIQDNFSYVDILSGKGHIVLDGLKHKTIKGKSVRVEIAQ
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggataaactagaatttaaagatttcgcattaagcgaagatatattaaagtcaatagaa
aaattgggatataaaaatccgtctcaggttcaagaaaaagtaataccacttatttttaaa
aacaaggatattatagtaaagtcacaaaccggcagcggaaaaacagcagctttcgccata
ccaatctgtgaaaaaatagaacttgaagaaaaaaattcccaggtattagtacttgctcct
acaagagaacttgcactgcaaataaaagaagatttttacgatataggaagatttaagaga
ataaattgtactgcaatctttggaaaagagcctataacaactcagataaaagaacttaaa
caaagaactcacgtaatagttggaacaccaggaagaacactagatcatatagaaaaaggt
actctttccctgaagaaaatacaatatttgatcatagatgaagcagatgaaatgctaaat
atgggatttatagaccaagttaaggctgttctagataagctgcctaaaaatagagtaact
ctccttttttctgcaaccattccccaggaaatacttaaattatgtgctgcatatatgaat
aatcctattaatgtagaaatagacgccgaagatcccgtaataaatagaatcaatcaaata
tattatcagatagaggcatataaaaaattcgatttgttaaataagctagtatatactcaa
aggccagaaagttctatgatattttgcagaacaaagaagaatgtagaagaccttgtgctt
caaatgaaaggtaaaggttattcctgcagtggtcttcacggaggaatgcttcaatccgaa
agaattgatgttatgaaaagatttaaacgaggagaatttattttccttgtatgcacggat
gttgcagcccgtgggatagatgtagaaaatataactcatatcataaactatgatattcct
atggaaaaagaaagttatgttcatagaataggaagaaccggtcgtgccgggaaaagtgga
actgccataacttttgttacacctaaagaatatagatttctagaagaaatagaaaaattc
ttcaatcttactattgaaaaaggtacaattccatcaaaagaagaagtagaaaaaggtaag
gatatatacaaggaaaaattaaaagctgctcctaagataaaaaaagataaatccactaaa
ctaaataaagacatcacaaaaatatatataagtgcaggtaaaaagaaaaaaataagacca
ggagatattgctggaactatatcaagtatcgatggtattaatcctgaggacgttggcata
atagaaattcaagataacttttcttacgttgatatactatctgggaaaggccatatagtt
ctcgatgggcttaaacacaaaaccatcaaggggaaatctgtaagagtagaaatagctcaa
aaataa
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