KEGG   Clostridium autoethanogenum: CAETHG_3131
Entry
CAETHG_3131       CDS       T02883                                 
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
cah  Clostridium autoethanogenum
Pathway
cah02020  Two-component system
cah02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CAETHG_3131
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CAETHG_3131
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cah03021]
    CAETHG_3131
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:cah02035]
    CAETHG_3131
Transcription machinery [BR:cah03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CAETHG_3131
Bacterial motility proteins [BR:cah02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    CAETHG_3131
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 UPF0122 HTH_23 Sigma70_ECF
Other DBs
NCBI-ProteinID: AGY77334
UniProt: A0ABM5NXJ7
LinkDB
Position
3395790..3396515
AA seq 241 aa
MALADKLDIKEELVKKYLPLVKYIASRVIIGKTKYIEYEDLVSYGMLGLIDAINKFDKDR
GMKFSTYASIRIKGSMIDELRRNSPISKGAMDKLNKYNAAMDSLRTKLGREPSSEEIANE
LGMPLKKMMEIENYINYISIVSLEDLIFSEDDDIPLMGTVEDTKSPSPEKSLEKKEMLEY
LAKALDLLNEKDNLVITLYYYEKLTLKEIGHILNVSESRVCQLHSRAILHLRKNMTKLKY
V
NT seq 726 nt   +upstreamnt  +downstreamnt
atggctttggcggataaattagatataaaagaagaattggtaaaaaaatatcttcctcta
gtaaaatacattgcttctagggttataataggaaagaccaaatacattgaatatgaggat
ttagttagttatggaatgttagggcttattgatgcaataaacaagtttgataaagacagg
ggaatgaaattttctacttatgcgtcaataagaataaaaggttctatgatagatgaactt
aggagaaatagccctatttctaaaggcgccatggacaagcttaataaatacaatgcagct
atggattcccttcgtactaaactaggaagagagccatcaagtgaagaaatagcaaatgaa
ctaggtatgcccttgaaaaaaatgatggaaattgaaaattatataaactatatatctata
gtatctctagaagatttgatattttctgaagatgatgatattccacttatgggaactgta
gaagatactaaaagtccaagtccagaaaaaagtctggagaaaaaagaaatgctagaatat
ttagccaaagcattagatcttttaaatgaaaaagataatttagttattactctatactat
tatgaaaagttgactttaaaggaaataggtcatatattaaatgtatccgagtctagggta
tgtcaacttcacagcagagcaattttacatttaagaaaaaacatgactaaattgaagtat
gtatag

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