Clostridium autoethanogenum: CAETHG_3749
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Entry
CAETHG_3749 CDS
T02883
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cah
Clostridium autoethanogenum
Pathway
cah03420
Nucleotide excision repair
cah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAETHG_3749
03430 Mismatch repair
CAETHG_3749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cah03400
]
CAETHG_3749
Enzymes [BR:
cah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAETHG_3749
DNA repair and recombination proteins [BR:
cah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAETHG_3749
MMR (mismatch excision repair)
Other MMR factors
CAETHG_3749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
ChuX_HutX
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AGY77950
LinkDB
All DBs
Position
4035997..4038210
Genome browser
AA seq
737 aa
AA seq
DB search
MNLEVLKTEFKYLRDKIIEKQYEHLDPMQRKAVLNGENNCIVIACPGAGKTQTIINRVDY
LCRFGPIYNTDYVPNCLKTDDLQIMKKYLNDNSFKDVTAVNKIEHLLNSNKINPQNIVVI
TFTRAAALNMKNRYISIGNKEKSPFFGTFHSLFYNILKKHNKEINIIDPYKAHEIVKNTL
MYYLDFIGEERVKEVLNDISLLKNSETNIDLFKSKIDKSVFLKCFNEYENYKARNKLMDF
DDLQLKVKDMFLNQKSILDSYQNLFKYILVDEFQDSDNLQIELLQLIGSKGVIFAVGDED
QCIYSFRGSKPECMVNFDNYFKDGRKIYLKINYRSVKNVVELSKKIICNNKNRNVKLIEN
NRKNDGNIYFKVFEREKEQAFFVSNSIKEIINKGKYKYSHIAVFYRTNLESRSIIDAFLK
YNIKFKLLDGQYNFYEHFICKDLIAYLKLAVNMCDKNSFMRIINKPFRYIGKVNIKKVID
NRIRENCFDILRQVGDLPIFQLKNITVLEKNIRKLNRMKKQDRINYILDKLDYMDYLKNY
CMKLNRDMDELQDIIGEFREACGEFDSIESFLDNVGKVEQTLEKGKKEGNTVTLSTIHGV
KGMEFENVFIINCSEGLIPHANSIQNNLEEERRLFYVGVTRAIDNLTLCYSSTIRKKAVD
VSRFIEECDLLNSGELMKNCGLETGDYVVHKVFGSGKIIDKGDNCLKVLFSDNREIGFDL
SVLYNGQLMKDAARKCL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggaagtgttaaaaacagagtttaagtatttaagagataaaataattgaaaag
caatatgaacatcttgatcctatgcaaagaaaagcagttttaaatggtgaaaataattgc
attgtcattgcttgccctggagcaggaaagactcagactattattaatagagtggactac
ttatgtagattcggtcctatatacaatacagattatgtacctaattgtctaaagaccgat
gatttacagataatgaagaaatatttaaatgataattcttttaaagatgtgactgcagta
aataaaattgagcatttgttaaatagcaataaaataaatccacagaacatagttgttata
acttttactagagcagctgctctcaatatgaaaaacagatacatatctataggaaataaa
gaaaagtcacctttttttggaacattccactccctattttataatatattgaaaaagcat
aataaagaaataaatattatagatccttataaggcacatgagatagttaaaaatacactt
atgtattatctggactttataggagaagagagagtaaaggaagttctaaatgacatatct
cttttaaaaaatagtgaaactaacatagatttatttaaaagtaaaattgacaaaagtgta
tttttaaaatgttttaatgaatatgaaaattataaagctagaaataagcttatggatttt
gatgatttacaattaaaagttaaagatatgtttctaaatcagaaatctattctagatagt
tatcagaatttgttcaagtatattttagttgatgagtttcaggattcagataacctccaa
atagagcttttacaactaataggaagtaagggggttatatttgcagtaggagatgaggat
caatgcatatattcttttaggggatctaagccagagtgcatggtgaattttgataactat
tttaaagatggaagaaaaatttatttaaaaataaattacagaagtgttaaaaatgtagtt
gaattgtccaaaaagattatatgtaataataaaaatagaaatgtaaaacttattgaaaat
aacagaaaaaatgatggaaatatatacttcaaggtatttgaaagagaaaaagagcaggcc
ttttttgtatcaaattcaatcaaagaaattataaataagggaaaatacaaatatagtcac
atagctgtattttatagaacaaacctggaatcaagaagtataatagatgcttttttaaaa
tacaatataaagtttaaacttttggacggtcagtataatttttatgaacattttatatgc
aaggatttaatagcatatcttaaattggctgtaaatatgtgcgataagaatagttttatg
agaataataaataagccttttaggtatattggaaaagtaaatataaaaaaagttatagat
aatagaataagggaaaattgctttgatattttaaggcaagtaggtgatttacctattttt
cagcttaaaaacataactgtgcttgaaaaaaatattagaaaattaaatagaatgaagaag
caggatagaataaattatatattggataaattagattatatggattatttaaaaaattac
tgcatgaaattaaatagggatatggatgaacttcaagatattataggagagtttagggaa
gcttgcggagaattcgatagtatagaatcatttttggataatgttggaaaagtggagcag
actttagagaaaggtaagaaagaaggtaatacagttactttaagtactattcacggcgtg
aaaggtatggagtttgagaatgtgttcataataaactgcagcgaaggattaattccccat
gcaaatagcatacaaaataatctggaagaagaaaggcggcttttttatgtaggggttaca
agagccatagataatttgactttgtgttattcaagtactattaggaaaaaagcagtagat
gtatccaggtttatagaggaatgtgatttgctaaattcgggagagcttatgaaaaattgc
ggcttagagacaggagattatgtagttcacaaagtatttggaagtggaaaaataatagat
aagggagataattgcttaaaagtattattttcagataatagagagataggatttgattta
tcggttctttataatggacagctgatgaaggatgctgctagaaaatgtttgtga
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