Catenulispora acidiphila: Caci_0866
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Entry
Caci_0866 CDS
T00967
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cai
Catenulispora acidiphila
Pathway
cai03030
DNA replication
cai03430
Mismatch repair
cai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Caci_0866
03430 Mismatch repair
Caci_0866
03440 Homologous recombination
Caci_0866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cai03032
]
Caci_0866
03400 DNA repair and recombination proteins [BR:
cai03400
]
Caci_0866
Enzymes [BR:
cai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Caci_0866
DNA replication proteins [BR:
cai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Caci_0866
DNA repair and recombination proteins [BR:
cai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Caci_0866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ACU69799
UniProt:
C7Q2F7
LinkDB
All DBs
Position
1006366..1006980
Genome browser
AA seq
204 aa
AA seq
DB search
MSDLEDGLVNGYAVVDVETSGFQPPIAEILEVAIVHVDATGQVTGSWDSLLRPQGGVGAT
RVHGITREMVEPAPRFEDVGMELHGLLVDRVVVAHNLAFDAKFLVTQFARLGVHSPEIAG
GACTLRTSQAMLPGPSYKLLDCCEAVGVELTDAHSALGDALATARLLGFFLQRGVNVGGM
AVRPQAAVPQPRAELGDLFLSRSR
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacctcgaagatgggttggtgaacggatacgcagtcgtcgatgtcgaaacttcc
ggattccagcctccgatcgccgagatcctggaagtcgcgatcgtgcatgtagacgccacc
gggcaggtgacgggcagttgggacagtctgctgcgaccgcagggcggggtcggggcgacg
cgggtgcacggcatcacgcgcgagatggtggagccggcgccgcgcttcgaggacgtcggc
atggagctgcacgggctgctcgtggaccgggtggtcgtggcgcacaatctggcgttcgac
gccaagttcctggtgacacagttcgcgcggctcggcgtgcactccccggagatcgccggc
ggcgcgtgcacgctgcggacctcgcaggcgatgctgccagggccttcgtacaagctgctg
gactgctgtgaggcggtcggggtcgagctgaccgacgcgcacagcgccctcggcgacgcg
ctggcgacggcacggctactcgggttcttcctgcagcgcggcgtcaacgtcggcggcatg
gcggtgcggccgcaggcggcggtgccccagccgcgagcggagctcggtgatctgttcctg
tccaggtcacgctag
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