Catenulispora acidiphila: Caci_1230
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Entry
Caci_1230 CDS
T00967
Name
(GenBank) YD repeat protein
Organism
cai
Catenulispora acidiphila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
SpvB
Motif
Other DBs
NCBI-ProteinID:
ACU70155
UniProt:
C7Q767
LinkDB
All DBs
Position
complement(1387528..1394103)
Genome browser
AA seq
2191 aa
AA seq
DB search
MIGMSPPSSGRRRHARWRHRLTTVAAAGAMLAGSGLNPAQAAPAGAGKHWQPVATQKTPS
VPGHAGVPAGQPAPATSANHGVPPVAYQATAPVWPAGQASATLAAPVPPATPAAAEPKPA
TGSGGHPTSPPADSSPTAANSSDTAGPAAKLAGLPVTLASADGTTAATVAFAPRAAVAAA
GVDGVILTLSRTDGGRTASPVDLSLDYKGFATASGGGYADRLTLVEMPACALTTPTVPSC
RAQTPIAAKNDTASGTLSAQVALSATPMVLAASPQASGGVGDYSATSLSPEGSWSSGGNT
GSFAYSYPIAVPPASGGTAPSVALSYDSGSVDGRTSVTNAQASWIGDGWDYSPGFIERSY
QPCSQDGIKNSGDTCWGGNQVTLSMSGLSGTLVRDDTTGAWHSQSDSGDKVIALTGVSNG
AFQGEAWEIITPDGTRYYFGQDYLPGGTGTDAATDSVWTQPVYCPKSGDGPPSGSCYDSS
KGTGSVVTNMAWRWNLDYTVDPHGNLRTYSWTPETDEYEMGYGQNNNNGKLTPYDRGGYL
TSIGYGYSLSAAIAGAKPAETVTFGTEERCLTSSSFTNCANSNLSSTTAAHWPDVPFNQV
CAAGATACANYSPTYFSTKRLTSISTAVLVGSGYQPVDSYTLSQSFPAPQAGQVPAGSSV
SATNPGDGTVAVMWLDSIQRTGADTLGGGAAAQLPKTVFTADEMPNRVDGNTTGAAALYR
PRLTEITTDSGAQTVIAYSSSQCSRTGNKLPASPDADTMNCYPQYWTPNGAQNPVLDWFT
TYQVSSVTVNDLVAPRAWNEVSLTSYNYAGAAWHRDDSPLTPAAQRTWNQFRGFRTVTAT
TGASSVQSTPTQTVTTFLQGMDGDYQASGSKRGVSVADTVGDTVTDNNWLAGQLLEKDTL
LGVGGAAQNKEVGGPWTFTPTATESQASSMPALVARMTAGTTDRKYQLWHDGTWEQTKLA
ATFNAQAQQVTSDTTYSGPSALPEQCTTTKYATNAAANMVTYPDESLTVTGSCSTKPSAT
ATQSDTLTFYDSSSTLGSLGSTGNATMTQKAASYNASGAPVYTTTAKAQFDSYGRTTSAT
DADGNTTTTAYSAPGAAADTVTVTNPMHWITKQTLDPGRGQAVSSTDVDNELTTKTYDGL
GRVTAVWTPLHSQAAKAPADYTYTYAVTGTAPTAVKTSTLRDDGSYGAVIALYDGQLRQI
QQQGGTADGEVGRLITDTHYNSLGQKAKTTDTYYEKTTAPTAAVFVPANDSAVPAEAETL
YDGMGRAAQSLTVAFGVNQYSTLTGYRGTDETDTTPPAGGTATSSFLDAAGNVDATWSYR
TATATGKAADAETNSRVYTPAGQPSTIKDAVGDTWSYGYNLLGQNTSVSDPGTGLATSVY
STGGSLLSRTDANGDQLSYTYDALKRKIAEYDTTGGAAETSADQIGAWTYDTLAKGQPTS
STTYTDGAADAANTWTETVAGYTAKYQPTGETVTVPSSQGALAGTYQDSSQYTAETSLLA
GTHYFAEGNLPKEQVNFGYTPTGLLSSYGSPYAALNTVTYSPLGQVLQTNYGANGDQYGR
TVTYDPATKRMLTTTDSLQTLSKPMQSVAYTYNQAGAITAESNSVTGSSTPDTQCFGYDQ
LNELTSAWTDSGGVTATSAAGNAQVDGVGGCTDSAPTAGKVTGGPAPYWQSYSYDALGDR
IGETSHDTSVASSANTVTQTLAYSAYNPSTGATAAASTPDAVQSVTTAGTSGSTSAPYTY
YPNGETESRPGQAFTYNAMGLTQSVKNTTTGVASTYTYDADGTLLLQSDPAAAQNVLYLP
WGEQVTLNTSGNTVSSLRYISDSPDGVSVVHSSAGTVGYELTNTNGTATAEVNASNLTYS
LRYYDPFGQQRGAAPPSWPDQRAYLDKPSDPTSGLDLLGARQYDPVTGRFLSVDSVQENT
DQRQLNGYSYAGDNPVNGSDPTGTMLACEDGPGSVCYYPHPAPPKKSGSSSSSSSDSGDS
GDGGEDPFFPIYEKVRSYVEKNLAPLDAAAFDKILELAQNKASETQVLNTIDRMLEITAA
LKMGKLADGIDTILQATHFDSLVAVTREGTPFLAASRTTAVMGLIADYGDVVLPPDKGAA
GWVDRGAGAVNGGLLMANMVVDEIPVAGQVMMIGTGIYLGGDYLYHHWKPFHNAVNDVGH
GVSSFFGGLFGGGSDSSDAAPKPQWPNGCGG
NT seq
6576 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggatgtcccctccgtcgtccggcagacgccggcacgcacgatggcgacaccgc
ctcaccaccgtcgcggccgcgggcgccatgctcgccggcagcggcctgaacccggcccag
gcggcaccggcgggtgccggcaagcactggcagccggtcgccacgcagaagacgccgtcg
gtgcccggccacgccggggtgcccgccgggcagccggctccggcgacgtccgcgaaccac
ggtgtgccgccggtcgcctaccaggcgacggcaccggtctggcctgcgggtcaggcttct
gcgacgctcgccgcccccgtcccgcccgcgacgcccgccgccgccgaacccaagcccgcg
accggatccggcggacaccccacgagcccgcctgccgattcctcgccgaccgcggcgaac
tcctcggacaccgccggtccggcggccaaactcgccggcctgccggtgaccctcgcctcc
gccgacggcacaaccgccgccacggtcgcgttcgcaccccgcgccgccgtcgcggcggcg
ggcgtggacggcgtcatcctcaccctgtcccgcaccgacggcggacggaccgcctcccct
gtcgatctgtcgctggactataagggctttgcgacagcgagcggcggcggctacgccgac
cgcttgaccttggtggagatgccggcgtgcgccctgacgacgccgacggtgccgtcatgc
cgcgcgcagacgccgatcgcggcgaagaacgacaccgcgtccggcacgctgtccgcgcag
gtggcgctctccgcgacgccgatggtcctggccgcctcgccgcaggcgtccggcggtgtc
ggcgactactcggcgacttcgctctcccctgagggctcgtggtccagcggcggcaacact
ggttcgttcgcctacagctatccgatcgccgtacccccggcctccggcggcacggcgccc
agtgtcgcgctgtcctacgattcgggcagcgtggacggccgcacctcggtcaccaacgcc
caggcgtcctggatcggcgacggctgggactactcgccgggcttcatcgagcgttcctac
cagccgtgctcccaggacggcatcaagaactccggtgacacctgctggggcggcaaccag
gtcaccctgagcatgagcggactgagcgggaccctggtccgcgacgacaccaccggcgcc
tggcactcccagtccgactccggagacaaggtgatcgcgctgaccggcgtctcgaacggc
gcgttccagggcgaggcgtgggagatcatcacccccgacggcacgcgctactacttcggg
caggactacctccccggcggcaccgggaccgacgcggcgaccgacagcgtgtggacccag
ccggtctactgccccaagtccggcgacggcccgccctcgggcagctgctacgactccagc
aagggcacgggctcggtcgtcaccaacatggcgtggcgctggaacctggactacaccgtg
gacccgcacggcaacctgcgcacgtactcctggacgcccgagaccgacgaatacgagatg
ggctacgggcagaacaacaacaacggcaagctgactccctacgaccggggcggctacctg
acctcgatcggttacggctactcgctgtcggcggcgatcgccggcgccaagcccgccgag
accgtgacgttcggcaccgaggagcgctgtctgaccagctcgtcgttcacgaactgcgcg
aactccaacctgagctcgaccaccgccgcgcactggccggacgtgccgttcaaccaggtc
tgcgcggctggggcgaccgcctgtgccaactactccccgacctacttctccaccaagcgc
ctgacgtcgatcagcaccgcggtcctggtcggctcggggtaccagccggtggacagctac
acgctgtcccagtccttcccggcgccccaggccggccaggtcccggccggatccagcgtc
agcgccacgaatcccggcgacggcacggtcgcggtgatgtggctggactcgatccagcgc
accggcgcggacaccctcggcggcggcgcggccgcgcagctgccgaagacggtgttcacc
gccgacgagatgcccaaccgggtcgacgggaacaccaccggcgcggcggcgctgtaccgg
ccgcggctgacggagatcaccaccgactccggggcgcagaccgtcatcgcctacagctcg
tcgcagtgttcgaggacgggcaacaagctgccggcctcgccggacgcggacacgatgaac
tgctatccgcagtactggactcccaacggcgcccagaacccggtcctggactggttcacc
acctaccaggtcagctcggtcacggtgaacgacctggtggcaccgagagcctggaacgag
gtgtcgctgacctcgtacaactacgccggcgccgcctggcaccgggacgactcgccgctg
accccggcggcccagcggacgtggaaccagttccgagggttccgcacggtcaccgcgacc
accggcgcgtcctcggtccagtccacgccgacgcagaccgtgacgacgttcctgcagggc
atggacggcgactatcaggcctctggctccaagcgcggtgtcagcgtcgccgacaccgtc
ggggacacggtcaccgataacaactggctggccggccagctcctcgagaaggacaccttg
ctcggggtcggcggcgcggcgcagaacaaggaggtcggcggaccctggaccttcaccccg
accgccacggaatcgcaggcctcgtcgatgcccgcgctggtggcccggatgaccgcgggc
accacggaccgcaagtaccagctctggcacgacggcacctgggagcagaccaagctggcg
gcgaccttcaacgcacaggcgcaacaggtcacctccgacacgacctactccgggccctcc
gcgttgccggaacagtgcacgaccaccaagtacgccacgaacgccgcggcgaacatggtc
acctaccccgacgagtccctgacggtcaccggctcctgctcgaccaagccgtcggcgacg
gccacccagtcggacacgctgacgttctatgacagctcctcgacgctggggtcgctgggc
tcgacgggcaacgcgaccatgacccagaaggctgcgtcgtacaacgcctccggcgcaccg
gtgtacaccaccacggccaaggctcagttcgactcctacggccggaccacatccgcgacg
gacgccgacggcaacaccacgacgacggcctacagcgcgccgggcgccgcggccgacacc
gtgaccgtcaccaacccgatgcactggatcacgaagcagaccctggaccccggccgggga
caggccgtctccagcacggacgtcgacaacgagctgaccaccaagacctacgacggtctg
ggccgggtcaccgcggtgtggacgccgctgcacagccaggccgccaaggctccggcggac
tacacgtacacctacgccgtgaccgggacggcgccgaccgccgtcaagacgtccacgctg
cgcgacgacggctcgtacggggccgtcatcgccctgtacgacgggcagctgcggcagatc
cagcagcagggcggcaccgccgacggcgaggtcgggcggctgatcaccgacacccactac
aactcgctcggccagaaggcgaagaccaccgacacctactacgaaaagaccacggcgccg
accgccgccgtcttcgtcccggcgaacgactcggccgtgccggccgaggccgagacgctg
tacgacgggatgggccgcgcggcgcagagcctgaccgtcgcgttcggcgtgaaccagtat
tcgacgctgaccggctaccggggcaccgacgagaccgacaccacgccgcccgccggcggc
accgcgaccagcagcttcctcgacgccgccgggaacgtggacgcgacctggtcctaccgg
accgccaccgcgaccggcaaggcggccgacgccgagacgaacagccgcgtctacaccccg
gccgggcagccctcgaccatcaaggacgcggtcggcgacacctggtcctacggctacaac
ctgctcgggcagaacaccagcgtgtccgacccgggtacgggccttgccacctcggtgtac
tccaccggcgggagcctgctcagccgcaccgacgcgaacggagaccagctctcgtacacc
tatgacgcgctgaagcggaagatcgccgagtacgacaccaccggcggcgcggccgagacc
tcggcggaccagatcggcgcgtggacctacgacacgctggccaagggccagcccacgtcg
tcgaccacgtacaccgacggcgccgccgacgcggcgaacacctggaccgagaccgtcgcc
ggatacacggcgaagtaccagccgaccggcgagacggtcaccgtgccgtcctcgcagggc
gcgctggccggtacctaccaggactcgagccagtacaccgccgagacctcgctgctcgcc
ggcacgcactacttcgccgagggaaacctgcccaaggaacaggtgaacttcggctacacg
ccgaccggactgctgtcgagctacggcagcccctacgccgcgctgaacacagtgacgtac
agcccgctggggcaggtgctgcagaccaactacggcgccaacggcgaccagtacggccgc
accgtgacctacgacccggcgaccaagcgcatgctgaccaccacggactcgctgcagacg
ctcagcaagccgatgcagtccgtggcctacacctacaaccaggccggagcgatcaccgcc
gagagcaactcggtcaccgggtcttcgacccctgacacccagtgcttcgggtacgaccag
ctgaacgagctgaccagcgcctggaccgactccggcggcgtcaccgcgacctcggcggcg
ggcaacgcgcaggtcgacggcgtgggcggctgcaccgactccgcgccgacagccggcaag
gtcacggggggacccgcaccgtactggcagtcgtactcctacgacgccctcggcgaccgg
atcggcgagaccagccacgacacgtcggtggcctcgagcgcgaacacggtcacgcagacg
ctggcgtacagcgcgtacaacccctcgaccggcgccaccgccgccgcgtccaccccggac
gcggtgcagtcggtgaccacggccgggacgtccggctcgacctccgcgccctacacctac
tacccgaacggagagaccgagagccgccccggacaggcgttcacctacaacgcgatggga
ctcacccagtccgtcaagaacaccaccaccggcgtggccagcacgtacacctacgacgcg
gacggcacgctgctgctgcagagcgacccggccgccgcgcagaacgtgctgtacctgccg
tggggtgagcaggtcacgctgaacacatccgggaacaccgtctccagcctgcgctacatc
agcgacagcccggacggcgtcagcgtggtgcactcctcggccggcaccgtgggctacgag
ctgaccaacaccaacggcaccgccacggccgaggtcaacgcctcgaacctgacgtacagc
ctgcggtactacgacccgttcgggcagcagcgcggcgcggcgccgccgagctggccggac
cagcgcgcgtacctggacaagcccagcgacccgaccagcggcctggacctgctcggcgcc
cggcagtacgacccggtcaccggccggttcctcagcgtcgactcggtccaggagaacacc
gaccagcgccagctgaacgggtactcctacgccggcgacaacccggtcaacggttcggac
ccgacggggaccatgctggcgtgcgaggacggccccggcagcgtctgctactacccccac
ccggcgccgccgaagaagagcggttcctcgtccagctcgtcctcggactccggcgactcc
ggcgacggcggggaggacccgttcttccccatctatgagaaggtccgttcctacgtcgag
aagaacctggcaccgctggacgccgcggcgttcgacaagatcctcgaactggctcagaac
aaggcctcggaaacccaggtcctgaacaccatcgaccggatgctggagatcacggccgcg
ctgaagatgggcaagctcgccgacgggatcgacacgatcctgcaggcgacgcacttcgac
agcctcgtcgcggtcacccgggaggggacaccgttcctggccgccagccggacgacggcg
gtgatgggcctcatcgccgactacggcgacgtcgtcctgccgccggacaagggcgcggcc
ggctgggtggaccgcggcgccggcgcggtcaacggcgggctgctcatggcgaacatggtc
gtcgacgagataccggtcgccggccaggtcatgatgatcggcaccggcatctacctcggc
ggcgactacctgtaccaccactggaagccgttccacaacgccgtgaacgacgtcgggcac
ggcgtgtcgagcttcttcggcggattgttcggcggtggttccgactccagcgacgccgcg
ccgaagccgcagtggcccaacggctgcggcgggtag
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