Catenulispora acidiphila: Caci_1583
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Entry
Caci_1583 CDS
T00967
Name
(GenBank) RNA binding metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cai
Catenulispora acidiphila
Pathway
cai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Caci_1583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cai03019
]
Caci_1583
Messenger RNA biogenesis [BR:
cai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Caci_1583
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
IpgD
Motif
Other DBs
NCBI-ProteinID:
ACU70504
UniProt:
C7QAA6
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All DBs
Position
1791024..1792706
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AA seq
560 aa
AA seq
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MVGLLIAIAAVVAACVGLLVGMNVGGSRRINNLKKSAYEDFDKQVAELAQRAQAREGEHA
SAVVAAQRDLAAVHREAAEVRKQADAQAVQIREQAASAATVEMDRARRIRDEAEAETRVL
KDDIRELRLDLERREARQAEREERLDADLRRTADKERELAAADAELERKRAELATLEDER
RAILERAAALSAGEAKTELVKSIENQAKREAAVLIRQIEQEARDEGDKRARKTVALAIQR
VASEQTAESVVSVLHLPSDDMKGRIIGREGRNIRAYESITGVNLIIDDSPEAVLLSCFDP
VRREVGRLTLEELVLDGRIHPHRIEEIYERSKAKVETLCVRAGEDALMELGITDMHPELI
ALLGKLRYRTSYGQNVLKHLVESAHLASIMASELRLDPVLLKRCTVLHDIGKALTHEVEG
SHALIGAEIARKYGEHDDVVHAIEAHHNEVEVRTVEAVLTQAADAISGGRPGARRESLEA
YVKRLERLEQIAAEQEGVEKVFAMQAGREIRVMVVPDAVDDIQAQVIARDIAKQVEEELT
YPGQIRITVVRESRATEYAR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcctattgatcgcgatcgcagcggtggtcgcggcatgcgtcggcctgctcgtg
ggcatgaacgtcggcggttcccgccgcatcaacaatctcaagaagagcgcctacgaggac
ttcgacaagcaggtcgccgagctggcgcagcgggctcaggcgcgcgagggcgagcacgcc
tccgcggtcgtggccgcccagcgcgacctggccgccgtgcaccgggaggccgccgaggtg
cgcaagcaggccgacgcccaggccgtgcagatccgggagcaggcggcctccgccgcgacc
gtggagatggaccgcgcgcgccggatccgggacgaggccgaggccgagacgcgcgtgctc
aaggacgacatccgcgagctgcggctggacctggagcggcgggaggcccggcaggccgag
cgcgaggagcggctggacgccgacctgcgccggaccgccgacaaggagcgcgagctggcc
gcggccgacgccgagctggagcgcaagcgggccgagctggcgacgctggaggacgagcgg
cgcgcgatcctggagcgcgccgccgcgctgtccgccggcgaggccaagaccgagctggtg
aagtcgatcgagaaccaggccaagcgcgaggccgcggtgctgatccggcagatcgagcag
gaggcgcgcgacgagggcgacaagcgcgcccgcaagaccgtggccctggccatccagcgg
gtggccagcgagcagaccgccgagtccgtggtcagcgtgctgcacctgcccagcgatgac
atgaagggccggatcatcgggcgcgagggccggaacatccgggcctacgagtcgatcacc
ggggtcaacctgatcatcgacgactcgcccgaggcggtcctgctgtcctgcttcgacccg
gtgcgccgcgaggtcggccggctcacgctggaggagctggtcctggacggccggatccac
ccgcaccgcatcgaggagatctacgagcgctccaaggccaaggtcgagacgctgtgcgtg
cgcgccggcgaggacgcgctgatggagctcggcatcaccgacatgcacccggagctgatc
gccctgctcggcaagctccgctaccgcacctcctacggccagaacgtgctcaagcacctg
gtggagtccgcgcacctggcctcgatcatggcctccgagctgcggctggacccggtgctg
ctcaagcgctgcacggtcctgcacgacatcggcaaggccctgacccacgaggtcgagggc
agccacgcgctgatcggcgccgagatcgcccgcaagtacggcgagcacgacgacgtcgtc
cacgccatcgaggcgcaccacaacgaggtcgaggtccgcaccgtcgaggcggtgctgacg
caggccgccgacgcgatcagcggcggccgccccggcgcgcgccgggaatcgctggaggcc
tacgtcaagcgtctggagcggctggagcagatcgcggccgagcaggaaggcgtggagaag
gtcttcgccatgcaggccggccgcgagatccgggtgatggtcgtccccgacgcggtcgac
gacatccaggcgcaggtcatcgcgcgggacatcgccaagcaggtcgaggaggagctgacc
tacccgggacagatccggatcaccgtggtgcgggagtcgcgcgcgaccgagtacgcacgc
tga
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