Catenulispora acidiphila: Caci_1763
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Entry
Caci_1763 CDS
T00967
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cai
Catenulispora acidiphila
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cai03032
]
Caci_1763
03400 DNA repair and recombination proteins [BR:
cai03400
]
Caci_1763
Enzymes [BR:
cai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Caci_1763
DNA replication proteins [BR:
cai03032
]
Prokaryotic type
DNA Topoisomerases
Caci_1763
DNA repair and recombination proteins [BR:
cai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Caci_1763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ACU70684
UniProt:
C7QCX4
LinkDB
All DBs
Position
1994398..1996527
Genome browser
AA seq
709 aa
AA seq
DB search
MSAQGRPAPSADKDGSYTARHLLVLEGLDAVRKRPGMYIGSNDGRGLMHCLWEIIDNSVD
EALAGFGDKIEIILHKDGSAEVRDTGRGIPVDVEPKTGLSGVEVVMTMLHAGGKFGGGSY
AASGGLHGVGASVVNALSSRVDMEVDRAGTVHAMSFQRGIPGVFADEGPEAKFKAESGLR
KVGKVSRALVPKSADGRRAAPTGTRTRFWPDRQIFLKDAEFVLEDLHARARQTAFLVPGL
TIRVVDERDGKQDEEIFSYAGGISEFVEFLAPDRPITDTLRFTGSGKFTETVPVLDEQGH
MTPADIERELFVDVALRWGTEYDTVIRSFVNIIATPKGGTHLVGFGKGLLKAANEQLRAT
KLLKVNDDDVIREDVFEGLTAVVTVRLAEPQFEGQTKEVLGTPAANRIVTRVVDNAFKEF
LTSAKRNDKPMARGVLEKIANAARTRITARQHKEAQRRKNALETSALPAKLADCRSDDVD
RSEMFIIEGDSAMGSAKAARNSEFQALLPIRGKILNVQKSSIADMLKNTECAAIIQVVGA
GSGRSFDIDQARYGKVILMADADVDGSHIRCLLLTLFHRYMRPMLEAGRVYAAVPPLHRI
EVIGAGRAKNEFIYTYSDNEMRRTVAELLKKGKRIKEPIQRYKGLGEMDADQLAETTMDP
RHRTLRRITVADGESADKAFDLLMGNDVAPRREFIINSAAVLDRSRIDA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcccaaggaaggcccgcgccgtccgccgacaaggacggctcctacaccgcgcgg
cacctccttgtcctcgagggactcgacgcggtccgcaagcggcccggcatgtacatcggc
tccaatgacggccgcggtctcatgcactgcctgtgggagatcatcgacaactcggtcgac
gaggcgctggccgggttcggggacaagatcgagatcattctgcacaaggacggctcggcc
gaggtccgggacaccggccgcgggatcccggtggacgtggagcccaagaccggcctgtcc
ggcgtcgaggtcgtcatgacgatgctgcacgccggcggcaagttcggcggcggctcctac
gccgcctccggcggtctgcacggcgtcggcgcctcggtggtgaacgcgctgagctcgcgc
gtggacatggaggtcgaccgggccgggaccgtgcacgccatgtcgttccagcggggcatc
cccggggtgttcgccgacgagggcccggaggcgaagttcaaggccgagtccgggctgcgc
aaggtcggcaaggtctcccgcgcgctcgtacccaaatcggccgacggccggcgagccgcg
ccgaccggtacccgcacccgcttctggccggaccggcagatcttcctcaaggacgccgag
ttcgtcctggaggacctgcacgcgcgggcccggcagaccgcgttcctggtgcccgggttg
acgatccgggtcgtggacgagcgggacggcaagcaggacgaggagatcttctcctacgcc
ggcggcatctcggagttcgtggagttcctcgccccggaccgcccgatcaccgacaccctg
cgcttcaccggctcgggcaagttcaccgagaccgtgccggtgctcgacgagcaggggcac
atgaccccggcggacatcgagcgcgagctgttcgtggacgtggcgctgcgctgggggacc
gagtacgacacggtgatccgctcgttcgtgaacatcatcgccacccccaagggcggcacg
cacctggtcggtttcggcaaggggctgctgaaggcggcgaacgagcagctgcgggcgacc
aagctgctgaaggtcaacgacgacgacgtgatccgcgaggacgtcttcgaggggctgacc
gcggtggtcaccgtccggctggccgagccgcagttcgagggccagaccaaggaggtcctg
gggaccccggcggcgaaccggatcgtgacccgggtcgtggacaacgccttcaaggagttc
ctgacctccgccaagcgcaacgacaagccgatggcgcgcggcgtgctggagaagatcgcc
aacgccgcccggacccggatcaccgcccggcagcacaaggaggcgcagcgccgcaagaac
gcgctggagacctccgcgctgccggccaagctggccgactgccgctccgacgacgtggac
cgctccgagatgttcatcatcgagggggactcggcgatgggctcggccaaggccgcgcgc
aactcggagttccaggcgctgctgccgatccgcggcaagatcctgaacgtccagaagtcc
tcgatcgccgacatgctgaagaacaccgaatgcgcggccatcatccaggtcgtcggcgcc
ggctcgggccgctcgttcgacatcgaccaggcgcgctacggcaaggtgatcctgatggcc
gacgccgacgtcgacggctcgcacatccgctgcctgctgctgaccctgttccaccggtac
atgcggccgatgctggaggccgggcgcgtctacgccgccgtgccgccgctgcaccggatc
gaggtgatcggcgcgggccgggcgaagaacgagttcatctacacctactcggacaacgag
atgcgccgcacggtcgccgagctgctgaagaagggcaagcggatcaaggagccgatccag
cgctacaagggcctcggcgagatggacgccgaccagctggccgagaccaccatggacccg
cgccaccgcaccctgcggcgcatcacggtggccgacggggagtccgcggacaaggccttc
gacctgctgatgggcaacgacgtggcgccacgccgggagttcatcatcaactccgcggcg
gtcctggaccgatcccggatcgacgcctaa
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