Catenulispora acidiphila: Caci_2081
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Entry
Caci_2081 CDS
T00967
Name
(GenBank) YD repeat protein
Organism
cai
Catenulispora acidiphila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
T7SS_signal
RHS
WXG100
TEN_YD-shell
ERO1
Motif
Other DBs
NCBI-ProteinID:
ACU71000
UniProt:
C7QG23
LinkDB
All DBs
Position
complement(2356937..2361523)
Genome browser
AA seq
1528 aa
AA seq
DB search
MARPTGWDVLGLDGDPTPGVVESVQALAKEFGDFAHDAEAAYHSLSSFGSDATALQWVGQ
TADAFKGQFGPLPGRLQKLYTSYSEASDALSAYAPQLQAAQTKADTALRQAQDANSNLQR
ATNNANNAAADLKTAQQSHATTPNPQAVTDAQTAHDTAQTNLNNAKAHMAALTKQANDAY
NDRINAAKACGSALHRAQSDGIHNKHWWEHVGEVLSEVGGEIADIANELAPFLDILALAT
SWIPGVDVVTAALAEADNIIALVGTGMEVAGDAMQGHWGDALMGVGMLGLQFVGGKAIEK
VGGKLMDKYGGKLMEKLGSRGNKLACEGGDPVDVVSGRMLTAETDLVLPSVLPLFLRRSY
SSGYEAGRLFGPGWSSTLDIRLSVNSAGIHLTGDDAQVLNYPIPDPGQSVVSESGSRWPL
EWNREADEIRVSTPATGLVMHFPVAHFADENGQIRDLMALTDRNGNRIDFVRDAQGTPTA
VEHSGGYRVAVDTAATDGGLRVTGIRLLDGSQDGVIVRAFQYDRPGRLTGVVDSSGEPFR
YEHDTADRITAWVDRLGYRYVYEYGEDGRVVRGIGDGGFLSATFVYDDENEANTVLDSLG
QPTVYRYDETGHVVAITDPLGGTLLSEYDARGHLLSGTDAIGRTTRREYDADGNAVRVSR
PDGTEITAAFAGPAQPLEVNLPDGTAWRYTYDDRGNLASVTDPAGAVSTYRYDEHGAVVE
STDALGMATRVANDSTGLALEIVDPVGEVTRAVRDAFGRIVEVHGAVGEVVATEFTVEGL
PLRQTTNEGLTTTWTYDAERHAIEHVDPLGTVTRSEYGPFGKLTARTDTTGVRHTFAYDT
ELNLVRVTNPAGATWDYTFDGAGNIVAETDFGGRVLRYTHDAVGQLTARANGAGQVVRME
RNPMGQVVRRLAPEGETFYEYDTAGRVLAVTGPGSALSYTYDEAGRPLTEAVDGRVTEFA
YDAAGRRVGRLTPSGAVSRWDYDPQARRATLTAGSRQVAFDFDIAGRETVRTIDGGARLT
QQFDALGRLAGQRLAGDTTLLERSYSYRADGIPVAVSDSLRGARQYEVDAEGRVLSVQAQ
TWSESYSYDAFGNVAQDVRPAGRSDDSLDTPSFEGTRVRKTGRTHYDYDAQGRTIRAVRR
TLSGQRREWNYSWDSNDQLTQVTLPDGAVWQYTYDPTGRRTGKIRLSDDGGTPAERVWFS
WDGSRLVEQVTEGADGVRTALVWDYEANDGWRPVAQRRRSWAADAPQEAIDEAFHTIVTD
LVGTPTELVAPDGSIDWYTTTSLYGTTIATSSDHGADCPLRFPGQFRDDETGLHYNVHRY
YDPERGSYLSPDPLGLAAAPNDQAYVANPMVSADPLGLICLNAAQQIKDRVDFLHGKFEA
PYGQRENTVAIIRAMDKEGNIVHVVGWSGKESKTLFGDVDDEIGKNGLANEIRADPFDGD
AEVTALNHIRTNGWTPLGGAASRPCCPWCQNSLVHTPFSDTVGPAKLIGPESRTRFNPPA
GGKSIQTNQRLANGKSGGWLQGQTMFTW
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtccgacggggtgggatgttctggggttggatggggatccgacacctggcgtg
gtggaatcggtgcaggcgttggcgaaggagttcggggacttcgcccatgatgcggaagcg
gcgtatcacagcctgagctcgttcgggtcggatgctacggcgttgcagtgggtgggtcag
actgctgatgcgttcaaggggcagttcggtccgttgccggggcggttgcagaagctgtac
acgtcctacagcgaagcctccgatgcgctgtcggcgtatgcgccgcagcttcaggcggca
cagaccaaagccgacacggcgctgcgtcaggcgcaagacgccaactcgaatctgcaacgc
gctaccaacaacgccaacaacgctgctgctgatttgaagacggcgcagcagagtcatgcc
acgacacccaacccgcaggcggtcacagatgcgcagaccgcgcacgacaccgcacagacc
aacctgaacaacgccaaagcccacatggccgcgttgaccaagcaggccaacgacgcctac
aacgaccgcatcaacgcggcaaaggcgtgtggcagtgccctgcatcgcgcgcaatccgac
ggcatccacaacaaacactggtgggaacacgtcggcgaggtcctgtccgaagtcggcggc
gagatcgccgacatcgccaacgaactcgccccgtttctcgacatcctggcgctggccacc
tcctggatccccggcgtcgacgtcgtcaccgccgccctcgccgaagccgacaacatcatc
gcgctggtgggtacggggatggaggtcgccggggatgccatgcaggggcactggggcgac
gcgctcatgggtgtcgggatgctcggcttgcagttcgtcggcgggaaggcgatcgaaaag
gtcggcggcaagctgatggacaagtacggcggcaagttgatggagaagctggggagtcgg
ggcaacaagctcgcctgcgagggcggcgacccggtggacgtggtctccggccggatgctg
accgccgagaccgacctggtgctgccttccgtgctgccgctgttcctgcgccgctcctat
tcctccggctacgaggcgggccgcctgttcggtcccggttggtcctcgacgctggatatc
cggctgtcggtcaactccgccgggatccacctcaccggtgacgacgcgcaggtgttgaac
tacccgatcccggatccggggcagagtgtggtgtccgagagcggttcgcgctggccgctg
gagtggaaccgcgaggccgacgagatccgggtcagcacgccggcgaccggcctggtcatg
cacttcccggtcgcgcacttcgccgacgagaacgggcagatcagggatctgatggccctg
accgaccgcaacggcaaccggatcgacttcgtgcgcgatgcgcagggcacgccgaccgcc
gtcgagcacagcggcggctaccgcgtcgccgtcgacaccgccgccaccgacggcggtctg
cgggtcaccggcatccggctgctcgacggctcgcaggacggcgtcatcgtccgcgccttc
cagtacgaccggcccggccgcctgaccggcgtcgtcgactcctcgggcgagccgttccgc
tacgagcacgacaccgccgaccgcatcaccgcgtgggtggaccgcctcgggtaccgctac
gtctacgagtacggcgaggacggccgcgtggtccgcggcatcggcgacggcggcttcctg
tcggcgaccttcgtctacgacgacgagaacgaggcgaacaccgtcctggactccctcggc
cagccgaccgtctaccgctacgacgagaccggtcacgtcgtggcgatcaccgatccgctc
ggcggcaccctgctcagcgaatacgacgcgcgcggccacctgctctcgggcaccgacgcg
atcgggcgcaccacccggcgcgaatacgacgccgacggcaacgccgtccgcgtcagccgc
cccgacggcaccgagatcaccgccgcgttcgccggtcccgcgcagccgctcgaggtgaac
ctgcccgacggcacggcctggcgctacacctacgacgaccgcggcaacctggcctccgtc
accgacccggccggcgcggtctcgacctaccgctacgacgagcacggcgccgtggtggag
tcgacggacgcgctgggcatggcgacccgcgtcgccaacgacagcaccggactcgcgctg
gagatcgtcgatccggtcggcgaggtgacgcgcgccgtgcgcgacgcgttcgggcggatc
gtggaggtgcacggcgcggtcggggaggtcgtcgccaccgagttcaccgtcgagggactg
ccgctgcggcagaccacgaacgagggcctgaccaccacctggacgtacgacgccgaacgg
cacgccatcgagcacgtcgacccgctcggtaccgtgacccgctccgaatacggcccgttc
ggcaagctcaccgcgcgcaccgacaccaccggcgtccgccacaccttcgcctacgacacc
gagctgaacctggtccgggtcaccaaccccgctggcgcgacgtgggactacaccttcgac
ggcgcgggcaacatcgtcgccgagaccgacttcggcggccgcgtcctgcgctacacgcac
gacgccgtcgggcagctgaccgcgcgcgccaacggcgccgggcaggtcgtccggatggag
cgcaacccgatgggccaggtcgtccggcggctggcgccggaaggggagaccttctacgag
tacgacaccgccgggcgcgtcctggcggtgaccggaccgggctcggcgctgtcctatacc
tacgacgaggcgggacggccgctgaccgaggcggtcgacggccgcgtcaccgagttcgcc
tacgacgccgccgggcgccgggtcgggcgcctgacgccgtccggcgcggtctcgcgctgg
gactacgacccgcaggcgcggcgggcgacgctgacggccgggagccggcaggtggcgttc
gacttcgacatcgccggacgggagacggtccgcacgatcgacggcggcgcgcgcctgacg
cagcagttcgacgccttgggccggctggccgggcagcggctcgccggcgacacgacgctg
ttggagcgctcttactcctaccgcgccgacgggatacccgtggcggtctccgactcgttg
cgcggtgcgcggcagtacgaggtcgacgccgagggccgcgtgttgagcgtgcaggcgcag
acgtggagcgagtcgtacagctacgacgcgttcggcaacgtcgctcaggacgttcgccct
gccggccgcagtgatgacagcttggatactccctccttcgaggggacgcgcgtccgcaag
accgggcggacccactacgactatgacgcgcagggccgcacgattcgcgcggtgcggcgc
acgctgtcggggcagcgtcgcgaatggaactacagctgggactccaacgaccagctgacg
caggtgacgctgccggacggcgcggtatggcagtacacgtatgacccgaccggtcgccgc
accggcaagatccggctctcggacgacggcggcacgccggccgagcgcgtctggttctcc
tgggacggctcgcgtctggtcgagcaggtcaccgagggcgcggacggcgtccggaccgcg
ctggtgtgggactacgaggcgaacgacggctggcgcccggtcgcgcagcggcgccgttcc
tgggccgccgacgcgccgcaggaggcgatcgacgaggcgttccacacgatcgtcaccgac
ctggtgggcacgccgacggagctggtcgcgcccgacggctcgatcgactggtacaccacg
accagcttgtacgggacgacgatcgccacgtcgtcggaccacggcgccgactgtccgctg
cgcttcccgggccagttccgcgatgacgagaccgggctgcactacaacgtgcaccggtac
tacgacccggagcgcggctcgtatctgagcccggacccgctgggactcgcggcggcgccg
aacgaccaggcgtatgtggccaacccgatggtctcggcggacccgctcggactcatctgt
ctgaacgccgcgcagcagatcaaggaccgtgtggacttcctgcacgggaagttcgaagct
ccgtacggccagcgggagaacaccgtcgcgatcatccgcgcgatggacaaggagggcaac
atcgtccacgtcgtcggctggagcgggaaggaaagcaagaccctgttcggcgacgtcgac
gacgagatcggcaagaacgggctggccaacgagatccgcgccgacccgttcgacggcgac
gccgaggtcacggcgctgaaccacatccgcaccaacggctggacgccgctgggcggcgcg
gcgagccggccgtgctgcccctggtgccagaactcgctggtccacacccccttcagtgat
acggtcggtcccgccaaactgatcgggccggagagccggacccggttcaacccgcccgcg
ggtggaaaatcgatccagaccaaccagcggctcgccaacggcaagagcggcggatggctc
caagggcaaaccatgttcacctggtag
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