Catenulispora acidiphila: Caci_2421
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Entry
Caci_2421 CDS
T00967
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cai
Catenulispora acidiphila
Pathway
cai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Caci_2421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cai03019
]
Caci_2421
Messenger RNA biogenesis [BR:
cai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Caci_2421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_3
RMMBL
Motif
Other DBs
NCBI-ProteinID:
ACU71339
UniProt:
C7PVU7
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All DBs
Position
2738834..2740126
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AA seq
430 aa
AA seq
DB search
MAATVEFWGGVGVIGSSKVLITEGDHRVLLDFGLDIPRGTDLFRPPVVPRPHRYLADRLR
VGAAPRLPGVYDPAMLEPGDPLAQDGPATAVFVSHAHIDHCGLVGALRPGIEVHAAPETV
AVMRALTAAGDGLPGGDPDWRPLAEEESACFGPLTVERVTVDHDVPGASGYLVTTSDGVL
AFTGDIRFHGRAPERAWRLAERAAGCEMFVTEGTALGLPVFPGPVRTEQDVVRDFAAALE
EARGDLVLLAMYPRDLERVAEFIEVAGAAGRKIVWGEAVAVFLRELGVQDVLAFSEVGLQ
ALKDDPGGFVYQPDLRDLRGIPDLADLPVGERTVWLHANGEPLGPFESRWPLFTEWLDVL
GIPLRRIGSFGHATADDLHTLVHRVAPRTVVPIHTDAPERLHPVAGPVRLLPVLAQSYDL
GGHPIERTPK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaccgtcgagttctggggcggggtcggcgtgatcggctccagcaaggtcctg
atcaccgagggcgaccaccgcgtcctgctcgatttcgggctcgacatcccccgcggcacc
gacctgttccgcccgccggtcgtgccccggccgcaccgctacctcgccgaccggctgcgg
gtcggcgcggcgccgcggctgcccggggtctacgacccggcgatgctcgagccgggggac
cccttggcgcaggacggcccggccacggcggtgttcgtcagccacgcgcacatcgaccac
tgcgggctcgtcggagccctgcggcccggtatcgaggtccacgccgccccggagaccgtc
gcggtgatgcgggcgctgaccgccgccggggacggcctgcccggcggcgacccggactgg
cgcccgctggccgaggaggagtcggcgtgcttcggcccgctgaccgtcgagcgcgtcacg
gtcgaccacgacgtgcccggtgccagcggctacctggtgaccacctccgacggcgtgctg
gccttcaccggcgacatccggttccacggccgcgcgccggagcgcgcctggcgcctggcc
gagcgcgcagccggttgtgagatgttcgtcacagagggcacggcgctgggtctgccggtg
ttccccggcccggtccgcaccgagcaggacgtcgtccgggacttcgccgcggcgttggag
gaggcgcgcggggacctggtgctgctggcgatgtacccgcgtgacctggagcgggtcgcg
gagttcatcgaggtcgccggcgccgccggacggaagatcgtctggggcgaggcggtcgcg
gtgttcctgcgggaactaggcgtccaggacgtgctcgccttctccgaggtcgggctgcag
gcgctcaaggacgacccgggaggcttcgtctaccagccggatctgcgcgacctgcgcggc
atcccggacctggcggacctgccggtcggagagcggacggtgtggctgcacgccaacggc
gagccgctgggaccgttcgagtcgcgctggccgctgttcacggagtggctggacgtcctg
ggcatcccgctgcgccggatcggctcgttcggccacgccaccgccgatgacctgcacaca
ctggtgcaccgcgtcgcgccgcggaccgtggtgccgatccacaccgacgccccggagcgg
ctgcacccggtggccggtccggtccggctgctgccggtcctcgctcagtcctacgaccta
ggtggtcacccgatcgagcgaacgccaaaatga
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