Catenulispora acidiphila: Caci_2562
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Entry
Caci_2562 CDS
T00967
Name
(GenBank) transcriptional regulator, AraC family
KO
K18991
AraC family transcriptional regulator, activator of mtrCDE
Organism
cai
Catenulispora acidiphila
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cai03000
]
Caci_2562
Transcription factors [BR:
cai03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Caci_2562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_6
HTH_18
HTH_AraC
Cupin_2
AraC_binding
AraC_binding_2
Cupin_3
HTH_20
TetR_N
JmjC_2
Motif
Other DBs
NCBI-ProteinID:
ACU71480
UniProt:
C7PXM7
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All DBs
Position
2901691..2902611
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AA seq
306 aa
AA seq
DB search
MDAISTLIRMARLDGVVDVRCLLTGSHVLDNPPTSGRVPFHLLLDGYCTAEIDGHTIDLR
PGDVLVLPRGGEHRVRVTTEAPAVPADLRQGASVATLASSSADASTIDLFCGHYTYQPGA
GELLIAGLPDILHASFGTGPDSPLRLLGELMRSEAGLDGPGAGALLASLCEALLALVLRG
DGTGHPATTTLPTPWTAVAVTDPGLRAVIDAVVHRPREPWTIAVLAHLAGVSRATLVRHF
SAATGMGVADFLTRIRMTIAADLLTTTDRSLDAVAEAVGYQSTSAFGKAFRTATGTTPSR
LRRAVR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgatcagcaccctcattcgcatggcccggctggacggcgtcgtcgacgtccgc
tgcttgctcaccggaagccacgtcctggacaacccgccgacgtccggccgcgtacccttc
cacctcctgctggacggatactgcacggccgagatcgacggacacaccatcgacctgcga
cccggcgacgtgctcgtcctcccgcgcggcggagaacaccgcgtccgggtcacgaccgag
gcgccggccgtgcccgccgacctccgccagggcgcctcggtggcgaccctggccagctcc
agcgccgatgcctcgaccatcgacctgttctgcggccactacacctaccagccgggcgcc
ggagagctcctgatcgccggactgcccgacatcctccacgcctccttcggcaccggtccc
gactccccgctccgcctcctcggcgagctgatgcgcagcgaagcaggactcgacggcccc
ggagccggcgccctgctggcgtcgctgtgcgaagcgctgctcgccctggtgctgcgcgga
gacggcaccggccacccggcgaccacgaccctgcccaccccctggaccgccgtcgccgtc
accgaccccggcctgcgcgccgtgatcgacgccgtcgtgcaccgcccgcgggaaccgtgg
acgatcgcggtcctcgcgcacctcgccggcgtctcccgcgccaccctggtccggcacttc
tccgccgcgaccggcatgggcgtcgccgacttcctcacccggatcaggatgacgatagcc
gccgacctgctgaccaccaccgaccgcagcctcgacgccgtcgccgaagccgtcggctac
cagtcgacgtccgccttcggcaaagccttccgcaccgccaccggcaccaccccgtcgcgc
ctgcgccgagccgtcagatga
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