Catenulispora acidiphila: Caci_3328
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Entry
Caci_3328 CDS
T00967
Name
(GenBank) GAF sensor hybrid histidine kinase
Organism
cai
Catenulispora acidiphila
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
Laminin_II
GAF_3
Frankia_peptide
FBF1
RNase_Y_N
YscO-like
VPS18_RING_C
ATG14
Motif
Other DBs
NCBI-ProteinID:
ACU72235
UniProt:
C7Q7P2
LinkDB
All DBs
Position
3672077..3676525
Genome browser
AA seq
1482 aa
AA seq
DB search
MESPETRLDRPASTDPRLERILGALRAVRDGDFRRRIVVSGDDVVAEICVLCNDIAEANQ
GYLAELERVGAAVGRDGALGQRLAPGTGAGDWERQRETVNTLLDDLARPLLDTGRVLAAI
AQGDLSQQVVVDGRGDLADVGRTLDDMRLTLRTLASEVTRVAGEIGSDGRLGGQAEVPGA
AGTWKDLTDSVNLMAGNLTGQVRDIAQVATAVARGDLTRQITVDVRGELLELKTTLNTMV
NQLSGFADEVTRVAREVGSDGILGGQAKVPGVAGTWKDLTDSVNLMAGNLTNQVRSIARV
ATAVASGDLTQTIDVDVRGEILELKDTLNTMVEQLSGFASEVIRVAREVGTEGRLGGQAQ
VPGVAGLWRDLTDAVNSMANNLTNQVRNIAQVTTAVAQGDLGKKIDVDARGEILELKTTI
NTMVDQLSGFADEVTRVAREVGTEGNLGGQARVRGASGTWKDLTDNVNVMANNLTGQVRS
IARVATAVASGDLTKKITVEAKGEVAALAETFNGMVDTLSAFADEVTRVAGEVGTEGMLG
GQARVPGVAGTWKELTDRVNVMADNLTSQVRNIAQVTTAVANGDLTRRIDVDARGEILEL
KTTLNTMVDRLSAFASEVTRVAREVGTEGKLGGQATVEDVSGTWQRLTESVNQLASNLTT
QVRAIAEVATAVTEGDLTRAITVDASGEVADLKDNINQMIANLRATTNANQEQDWLNTNL
ARIAGLLPGRRDLASVAAMVLEELAPLVSAHSAAFFLAESEDGPLGFAEEAADVRLRMIA
GFGYAAAPGDGPVFAPGQGLVGQVAVSKKTVALTGAPAGYVPIRSGLGQTDATNVIVLPV
LFERQTLGVIELASVNVFTQTHRDFLETLKETIGTAVNTITTNVRTDALLRESQRLTTEL
QKRQSDLQESNNELEDKAAQLARQNKDIEIKNTEIEQARLTLEDRAQQLALASKVKSEFM
ANMSHELRTPLNSMLILARLLADNVDTNLTPRQVDFAQTIHSAGSDLLELINDILDLSKI
EAGRMEVQNESWPIADLAEGLAATFQPLAAEKGLRLRVDVTAGAPATVTADSQRVQQILR
NLLSNAVKFTDTGEVTLRVTAARGAHGEPAIAFAVVDTGIGIAEDKLELIFEAFQQADGT
TSRQYGGTGLGLSISRELTRLLSAELRVSSAPGRGSTFTLQLPIEPPAADAKVEPAGTDR
PSGADAGDAQAPAAVLVMEPVGVTTLADAVESVLDELTGIKGRVAVTRLSRAADLDGVLA
GGARPVCAVVDLGCPEAEVRAVLDAVTTGASSTPVMLYESVAEDGAADALRRSVRDAARW
EVAHSVPQVAERVTLHVLTGAPRLSGPGSEPDRPGRELPRFDGQKVLVIDDDIRNVFALT
SALELHGLTVVYAGNGREGIELLKQNEDVALALMDIMMPGMDGYATTARIRALDGFRDLP
IVAVSAKAMKGDREKSLAAGANEHVTKPVDMDLLLRLIKDLI
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggaatcccctgagacccggctggaccggccggcctcgaccgacccgcgtctggagcgg
atcctcggcgcgctgcgcgccgtgcgcgacggcgacttccgccggcgcatcgtcgtcagc
ggggacgacgtggtggcggagatctgtgtgctgtgcaacgacatcgccgaggcgaaccag
ggctacctggccgagctggagcgggtcggggcggccgtgggccgggacggcgcgctgggc
cagcggctggcgccgggcaccggcgccggggactgggagcgccagcgcgagaccgtcaac
accctgctggacgacctggcccggccgctgctggacaccggccgggtgctcgccgcgatc
gcccagggcgacctgtcccagcaggtggtcgtggacggccggggcgacctggccgacgtc
ggccggaccctggacgacatgcgcctgacgctgcgcaccctggcctcggaggtcacccgg
gtggccggggagatcggcagcgacggacgcctcggcggccaggcagaggtccccggcgcc
gcgggcacctggaaggacctcaccgactcggtcaacctgatggccggcaacctcaccggc
caggtccgcgacatcgcgcaggtcgccaccgcggtcgcccggggcgacctgacccggcag
atcaccgtcgacgtgcgcggcgagctgctggagctgaagaccaccctgaacaccatggtg
aaccagctgtccgggttcgccgacgaggtcacccgggtggcccgcgaggtcggcagcgac
ggcatcctgggcggccaggcgaaggtccccggcgtggccgggacctggaaggacctcacc
gactcggtgaacctgatggccggcaacctgaccaaccaggtgcgcagcatcgcacgggtg
gccaccgccgtggcctccggcgacctgacccagaccatcgacgtggatgtgcgcggggag
atcctggagctcaaggacaccctgaacaccatggtcgagcagctgtccgggttcgcctcc
gaggtgatccgggtggcccgcgaggtcggcaccgagggccgcctcggcggccaggcacag
gtccccggggtcgccgggctctggcgcgacctcaccgacgcggtgaactcgatggccaac
aacctgaccaaccaggtgcgcaacatcgcgcaggtcaccaccgccgtggcgcagggcgac
ctgggcaagaagatcgacgtggacgcccgcggcgagatcctggagctgaagaccaccatc
aacaccatggtcgaccagctctccggcttcgccgacgaggtcacgcgcgtggcccgcgag
gtcggcaccgagggcaacctgggcggccaggcgcgcgtgcgcggcgcctcgggcacgtgg
aaggacctgaccgacaacgtcaacgtcatggcgaacaacctgaccggccaggtccgcagc
atcgcgcgggtcgccacggcggtcgcttccggcgacctgaccaagaagatcaccgtggag
gccaagggcgaggtcgcggcgctcgccgagaccttcaacggcatggtcgacacgctctcg
gcgttcgccgacgaggtgacccgcgtggccggcgaggtcggcaccgagggcatgctcggc
ggccaggcgcgcgtgcccggcgtggccgggacctggaaggagctcaccgaccgggtgaac
gtgatggccgacaacctgaccagccaggtgcggaacatcgcgcaggtgaccaccgcggtc
gccaacggggacctgacccgccggatcgacgtggacgcgcgcggcgagatcctcgagctg
aagaccaccctgaacacgatggtggaccggctctctgccttcgcctccgaagtgacccgc
gtcgcccgcgaggtcggtacggaaggcaagctcggcggtcaggccactgtcgaggacgtc
tcagggacctggcagcgcctcaccgaatcggtgaaccagctcgcctccaacctgaccacg
caggtccgcgcgatcgccgaggtcgccaccgcggtgaccgagggcgacctgacccgcgcg
atcaccgtcgacgcctccggagaggtcgccgacctcaaggacaacatcaaccagatgatc
gccaacctgcgcgcgaccaccaacgccaaccaggagcaggactggctgaacaccaacctg
gcgcgcatcgccggtctgctccccgggcggcgcgacctggccagcgtcgcggccatggtt
ctggaggagctggcgccgctggtctccgcgcacagcgccgcgttcttcctcgccgagtcc
gaggacggaccgctgggcttcgccgaggaggccgcggacgtccggctgcggatgatcgca
gggttcggctacgccgccgcccccggcgacggcccggtcttcgcccccgggcagggactg
gtcgggcaggtcgcggtgagcaagaagacggtcgcgctgaccggcgcgccggccgggtac
gtgccgatccgctccgggctcgggcagaccgacgccaccaacgtcatcgtgctcccggtg
ctcttcgaacggcagacgctcggcgtgatcgagctggcctcggtcaacgtgttcacccag
acccaccgcgacttcctggagacgctcaaggagacgatcggcaccgcggtcaacaccatc
accaccaacgtccgcaccgacgcgctgctgcgcgagtcccagcgcctgaccaccgagctg
cagaagcgccagagcgacctgcaggagtcgaacaacgagctcgaggacaaggcggcgcag
ctcgctcggcagaacaaggacatcgagatcaagaacaccgagatcgagcaggcgcgcctc
accctggaggaccgcgcgcaacagctcgccctggcgtccaaggtcaagtccgagttcatg
gcgaacatgtcgcacgagctgcgcaccccgctgaacagcatgctgatcctggcccggctg
ctggccgacaacgtcgacaccaacctgaccccgcgccaggtggacttcgcccagaccatc
cactcggcgggctcggacctgctggagctgatcaacgacatcctggacctgtccaagatc
gaggccggccggatggaggtgcagaacgagtcctggccgatcgccgacctggccgaggga
ctggccgcgacgttccagccgctggccgccgagaagggcctgcggctgcgcgtggacgtc
accgccggcgcgccggccaccgtcaccgccgacagccagcgcgtccagcagatcctgcgc
aacctgctgtccaacgcggtgaagttcaccgacaccggcgaggtgacgctgcgggtgacc
gcggcgcgcggcgcgcacggcgagccggcgatcgccttcgcggtcgtggacaccggcatc
gggatcgccgaggacaagctggagctcatcttcgaggccttccagcaggccgacggcacc
accagccggcagtacggcggcaccgggctgggcctgtccatcagccgcgagctgacccgg
ctgctcagcgccgagctgcgggtctccagcgcgccgggccgggggagcaccttcaccctg
cagctcccgatcgagccgccggccgccgacgccaaggtcgagcccgccggcacggaccgt
ccctccggcgccgacgccggcgacgcgcaggcgccggccgcggtcctggtcatggagccg
gtcggggtcacaacgctggccgacgcggtcgagtcggtcctggacgagctcaccggcatc
aagggccgggtcgcggtgacccggctgtcccgggcggccgatctggacggcgtgctggcc
ggcggcgcgcgtccggtctgcgcggtcgtcgacctcggctgtccggaggcagaggtgcgc
gccgtcctggacgccgtcacgaccggcgcctccagcaccccggtcatgctctacgaatcg
gtggccgaggacggcgccgccgacgcgctgcgccgctcggtccgcgacgccgcccgctgg
gaggtcgcgcactcggtcccgcaggtcgccgaacgcgtgaccctgcacgtcctgaccggc
gccccgcgcctgagcggacccggctccgagccggaccgcccggggcgggagctgccgcgc
ttcgacggccagaaggtcctggtcatcgacgacgacatccgcaacgtcttcgccctcacc
agcgcgctggagctgcacggcctcaccgtggtctacgccggcaacggccgggagggcatc
gagctgctcaagcagaacgaggacgtggcgctggcactgatggacatcatgatgcccggc
atggacggctacgccaccaccgcccgcatccgcgccctggacggcttccgcgacctgccg
atcgtcgcggtcagcgccaaggcgatgaagggcgaccgcgagaagagcctggccgccggg
gcgaacgagcacgtcaccaagccagtggacatggatctgctgctgcggctgatcaaggat
ctgatctga
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