KEGG   Catenulispora acidiphila: Caci_3909
Entry
Caci_3909         CDS       T00967                                 
Name
(GenBank) CRISPR-associated protein, Cse1 family
  KO
K19123  CRISPR system Cascade subunit CasA
Organism
cai  Catenulispora acidiphila
Brite
KEGG Orthology (KO) [BR:cai00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cai02048]
    Caci_3909
Prokaryotic defense system [BR:cai02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    Caci_3909
SSDB
Motif
Pfam: CRISPR_Cse1 Cas3_HD Cas3-like_C_2 Cas3_C DEAD Helicase_C Ribosomal_L50
Other DBs
NCBI-ProteinID: ACU72797
UniProt: C7QEM7
LinkDB
Position
complement(4432703..4437325)
AA seq 1540 aa
MFNVGSTRCWGDGGLRNAAEDLSAATRSAWAKSDPDSGQSLSLIRHLADSAAIAEHLWDQ
WLPDHVKSLIAEGLPEGLVDGRTLAVWLAGTHDIGKLTPAFACQCEPLAQAMRECGLDMP
TRTQFGDDRRVAPHGLAGQVLLREWLMERHGWSGRSADAFTVIAGGHHGVPPSYSQLHDL
DAYPELLRTPGASEGIWKSSQHELLDACAVMTGASSRLAHWRGLRLSQQAQVLLTGLVIV
ADWIASNTDLFPYPALGTGEAAIDPGKRVELAWRGLELPAPWAPKYLMPGMQGLLASRFG
LPADAQLRPVQQMAVQLASANAAPGLLVIEAPMGEGKTEAALLAAEILAARSGAGGVFLA
LPTQATSNAMFARVVNWLRQVPREGVASVHLAHGKAALDDAFASFLRAAPRLTSIDADGY
AGEANVRRDRRAGSADMVAHQWLRGRKKGILSPFVVGTIDQLLFTGLKSRHLALRHLAVA
GKVVVIDEVHAYDAYMSVYLERVLSWLGAYRVPVVLLSATLPADRRQALVEAYGGITSEA
LRDAREAYPVLTAVTIGAPAQAVGTEPAEGRRVDVNVEAFDDDLGRLADRLEAELVDGGC
ALIIRNTVGRVLQTAQQLRERFGAGQVTVAHSRFIDLDRARKDADLLARFGHDGARPRRH
IVVASQVAEQSLDIDFDLLVTDLAPIDLVLQRMGRVHRHHRGGPEQSERPPSLRTARCLV
TGVDWAGIPSAPIAGSVAVYGLHPLLRSLAVLQPYLTGSALTLPGDINPLVQCAYAQSFV
APTGWGEAMDAAQAEHMAHIVQQREGAMAFCLDEVRGPGRSLIGWIDGGVGDADDTRAGR
AQVRDSPETIEVLVVQRGSDGVLRTLPWLDRGRGGLELPTEAVPPPRAARAAAASALRLP
GLFAKPWMFDRVLRELEREYHEAWQAKESSWLQGELLLVLDEECRTVLAGYELSYNPDDG
LEMVMPGEPHAAVVRDKEASDDKTASFDLTSAPWLPVLYADGMQGVLSLRDVFAQSNLIR
RLVGDLPTQDFALLRLLLAVLYDAVDGPRDGQDWEDLWTSDDPFAAVPAYLDSHRERFDL
LHPATPFYQVPGLQTAKGEVGPLNKIVADVPDGDPFLTMRMPGVEQLSFAEAARWLVHTQ
AFDTSGIKSGVVGDPKAVNGKRYPQGVAWLGNLGGVFAEGDTLRQTLLLNLIPADTTNLQ
VTSAQDVPAWRGTNGRAGSDHADAEPRVPAGLRDLYTWQSRRIRLEYDTRGVTGAVLTYG
DELTAHNKHGVEPMTGWRRSKPQEKKLGLSTVYMPQQHDPTRAAWRGIESLLAGSAGSGS
SQTGEPASHYRPKIVDWLGELAHHGNLPSRGLIRVRTSGAVYGTQQSIIDEVVSDELTMA
VVLLHEDDPRFGKAAVTAVKDADSAVAALGDLASDLARAAGLDPEPERVTARDRAFGALD
GPYRRWLLDLGNSTDPAAMRAVWQGRVYDIIAVQGQMLLDSAGSAAAQGRMVKTTRGERW
MDDSLADLYFKGRIAKALSSRLGKKPTDPGEPVGIQEDPA
NT seq 4623 nt   +upstreamnt  +downstreamnt
gtgttcaatgtcggcagcacgagatgttggggggatggtgggttgcgtaacgccgcagag
gacctgtccgcagcaacgcgatcggcatgggcaaagtccgacccggattcagggcaaagt
ctgtccctgattcggcatcttgcggactctgcggcgatcgctgaacacctgtgggaccaa
tggcttcctgaccatgttaagagccttattgctgagggccttccggaagggctggtcgat
ggcaggactctggcggtatggctcgcaggaacccacgacatagggaagctaacgccggca
tttgcctgccagtgcgaaccgctcgcacaggcaatgcgtgaatgtggccttgatatgccg
acacgcacgcagttcggcgacgaccgacgggtggcgccgcatgggctcgcgggccaggta
ctgctgcgtgagtggctcatggagcggcatggttggtccggacgatccgccgatgcgttt
acggtcattgcgggtggacaccacggggtgcccccgagctattcgcagcttcatgatctt
gatgcgtatccggaacttcttcgcacgcctggggcaagcgagggcatatggaagtcatcg
cagcatgagctgcttgatgcgtgtgctgtgatgaccggagcgtcgagtcgtctggcgcac
tggcgcggtttgaggctttcgcagcaggctcaggtactgctgactggtctggtcatcgtt
gctgactggatcgctagcaacaccgatctgttcccttatccggctctgggaacgggcgag
gcggcgatcgatcctggtaagcgcgttgagttggcctggcggggcctggagttgccagca
ccgtgggcgcccaaatatctgatgcctggcatgcagggtttgcttgctagccggttcggg
ctgccggcggacgcgcagctgcgtccggtccagcagatggctgtgcagttggcgtctgct
aatgccgcgccaggcctgttggtcatcgaggcgccgatgggggaagggaagaccgaagct
gcgcttcttgctgcggaaatcttggcggcccggagtggcgcgggtggggtatttctggcg
ctgccgacacaggccaccagcaatgcgatgtttgcacgggtggtgaactggcttcgccag
gtgccgcgcgaaggcgttgcctccgttcatttggcacatggaaaggcggcgttggatgac
gccttcgcctcgtttctgcgggctgcaccgaggctgacctctattgacgcggacgggtac
gccggtgaggccaatgttcgccgcgacaggcgagcaggctcggcggatatggtggctcat
cagtggcttcgtggccgcaagaaggggatcttgtcgccgttcgttgtcggcacgatcgac
cagttgctgttcacgggcttgaagtcgcggcatctcgcgctgcgacatctggcggtggcg
ggcaaggtcgtcgtcatcgacgaggtgcacgcctacgacgcctacatgagcgtgtatctg
gagcgggtgctgtcctggctcggcgcctaccgggtcccggtggtgttgttgtcagcgacg
ttgccggccgaccgtcggcaggctctcgtcgaggcctacggcggcatcacgtcggaggcg
ctgcgggatgcccgtgaagcgtacccggtcctgacagctgtgacgataggtgcgccggct
caggcggtcggtaccgagccggccgagggtcgccgcgtcgacgtgaatgtggaggcgttc
gacgacgacttgggccgacttgccgatcgtttggaggctgagctggtcgacgggggttgc
gcgctgatcatccgcaacactgtcggccgggtcttgcagacggctcagcagctgcgggaa
cgcttcggcgccgggcaggtgaccgtggcgcactcgcggttcattgacctggaccgggcg
cgtaaagatgccgatctactggctcggttcggccacgacggtgcacggccacgacgacac
atcgttgtggccagccaggtcgcggaacaatcacttgacattgactttgatttgctggtc
accgatctcgcacccatcgacctcgttctccagaggatgggacgggtgcaccgacatcat
cgcggcggtccggagcaatcggagcgtccgcccagcctacgcacggctcgatgtctggtg
accggggtggattgggcgggtattccgtcggcaccgatagcaggttcggtggcggtctac
gggctgcacccgttgctgcgtagcctggctgtcctgcagccgtacctgacaggaagcgcg
ctgacgttgccgggtgacatcaatcccctggttcagtgcgcgtatgcgcagagttttgtc
gcaccgacgggttggggcgaggctatggacgccgcgcaagccgagcacatggcgcacata
gtgcagcagcgcgagggggccatggcattctgcctcgacgaggtccgcgggccggggcga
tctctcatcgggtggatcgacggcggcgttggcgatgcggacgatacccgggctggtcgg
gcgcaggttcgcgacagcccggagacgatcgaggtgctagtcgtccaacgaggcagcgat
ggtgtcctgcggacgctgccgtggctggatcggggccgtggagggctcgagctgccgacg
gaagctgtgccgccgccgcgcgcagcccgagcggcggccgccagcgcgctgcgtctgccc
gggttgttcgccaaaccgtggatgttcgatcgggtgcttcgggaacttgagcgcgagtat
cacgaggcctggcaggcgaaggagagctcgtggctgcaaggcgagttgcttcttgtgctt
gatgaggagtgccggaccgtcttggccggctacgagttgtcctacaacccggatgacggt
ttggagatggtgatgcctggtgaaccgcatgccgctgtagtacgggacaaggaggcctcg
gatgacaagacggcttcgttcgatctgacctcagcgccgtggctcccggtgttgtacgcc
gacggtatgcagggtgtgctgtcgctgcgagatgtgttcgcccagtcgaacttgatccgc
aggttggtcggggatcttccgacccaggactttgcgctgctacgtctgctactggccgtc
ctatatgacgcggtagacgggccgcgcgacggtcaggactgggaggacctgtggacctcg
gatgacccgttcgcagcggtgccagcctatctggacagccacagggagcggttcgatctg
ctgcaccctgccacgcctttctatcaagttcccgggctgcagacagcgaaaggtgaagta
gggccgctcaacaagatcgtggccgacgtgccggacggtgatccgttcctcaccatgcgc
atgcccggtgtcgaacagctcagtttcgctgaggccgccagatggctggttcacacacaa
gcgttcgacacctcggggatcaagtcgggtgtcgtcggcgatcccaaagcggtgaacggc
aagcggtatccgcaaggtgtcgcctggctaggcaacctcggcggggtattcgccgaaggc
gacacgctgcgccagaccctgctgctcaacctcatccctgcagacaccacgaatctgcag
gtcacctccgcccaagatgtacccgcgtggcgaggtacaaacggcagggccgggagcgac
catgctgacgctgaaccccgtgttcctgctgggctacgcgacttgtatacctggcagtcg
cggcgtatccggctggagtatgacacccgcggcgtcactggggctgtgctgacctacggc
gacgaactcactgcgcacaacaagcatggcgtggaaccgatgacaggctggcggcgaagc
aagccccaggagaagaaactcggcctatccacggtctacatgccgcagcagcatgatccc
acgcgtgccgcctggcgggggatcgagtctctgttggctgggagcgcaggtagcggaagc
agccagactggggaaccggcctcccactaccgccccaagatcgtggattggctcggcgag
ctggcccaccacggcaacctgccaagccgcggactgatacgagtacgtacatcaggcgcc
gtgtacggaacacaacagtcgatcatcgacgaagtggtcagcgatgaactgactatggcc
gtcgtgcttctccacgaagacgacccccgcttcggtaaagccgccgtcacagcagtcaag
gacgcggactccgcagttgccgctctaggcgacctggccagcgaccttgcccgggccgcg
ggactcgacccggaaccagaacgcgtcaccgcgcgggaccgagcgttcggggcccttgac
ggcccgtaccgccgttggctgctggacctgggcaacagcactgacccggccgctatgcgc
gccgtgtggcaggggcgggtctacgacatcatcgcagtgcagggccagatgctcttggac
tcagctggctcggcagccgcacagggccggatggtgaagaccacccgcggggagcgctgg
atggacgattccttggctgacttgtacttcaaaggccgcatcgccaaggcgctcagtagc
cgtctcggtaagaagccaaccgatcccggcgaacccgtaggcatacaggaggacccggca
tga

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