Catenulispora acidiphila: Caci_4845
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Entry
Caci_4845 CDS
T00967
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
cai
Catenulispora acidiphila
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cai03021
]
Caci_4845
Transcription machinery [BR:
cai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Caci_4845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
HTH_3
HTH_Crp_2
HTH_23
HTH_Tnp_4
DUF7343
Motif
Other DBs
NCBI-ProteinID:
ACU73706
UniProt:
C7Q1H7
LinkDB
All DBs
Position
complement(5515759..5516556)
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AA seq
265 aa
AA seq
DB search
MAPIPVAPEELARERAAARAALARLRKMSPDDSEYEALREYVIGEYMSYARFVAARFRLR
GETQADLEQVAYLGLVKAVDNFDPDYGATFLTYATPMIAGEVRRHFRDTTWHVHVPRRAQ
ENALAVRAVERELTQQLGRAPSAAEIGRRLDLSADEVAEAYEASAAHHTASLDVPVAMAD
GDGASLGDLLGDEDPGFDSVVDREALKPLLAELSPRDKRILLMKFFRNMSQAQIGAEIGV
SQMQVSRLLSQIIGSLRDRLEVGKN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcccatccctgtcgccccggaggaactggcccgtgaacgggctgcggcccgggct
gcgctggcgcgtctgaggaagatgtcgcccgacgacagcgagtacgaggcactgcgcgag
tacgtcatcggcgagtacatgtcctatgcccgcttcgtggcggccaggttccgcctgcgc
ggtgaaacgcaggcggatctggagcaggtcgcctatctgggcctggtcaaagccgtcgac
aacttcgaccccgactacggcgcgacgttcctcacctacgccacgccgatgatcgccggc
gaggtgcggcgccatttccgggacaccacctggcatgtgcacgttccccgccgcgctcag
gagaacgcgttggcggtgcgggctgtcgagcgggagctgacccagcagctgggtcgcgcg
ccgagtgcggcggagatcggccgccggctggatctgtcggccgacgaggtcgccgaggcc
tacgaagccagcgccgcgcaccacaccgcctcgctggacgtgccggtggccatggccgac
ggcgacggcgccagcctgggggacctcctcggcgacgaggaccccggcttcgactcggtc
gtcgaccgggaagccctcaagccgctgctggccgaactcagcccgcgcgacaagcggatc
ctgctgatgaagttcttccgcaacatgtcccaggcacagatcggcgccgagatcggagtc
tcgcagatgcaggtctcccgcctgctgtcgcagatcatcggcagcttgcgggaccgactg
gaggtcgggaagaactga
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