Catenulispora acidiphila: Caci_5672
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Entry
Caci_5672 CDS
T00967
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
cai
Catenulispora acidiphila
Pathway
cai03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Caci_5672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cai03011
]
Caci_5672
Ribosome [BR:
cai03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Caci_5672
Bacteria
Caci_5672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
ACU74531
UniProt:
C7QC83
LinkDB
All DBs
Position
complement(6542747..6544228)
Genome browser
AA seq
493 aa
AA seq
DB search
MTSSTETARTPQVAINDIGSAEEFLAAIDLTIKYFNDGDIVEGVIVKVDRDEVLLDIGYK
TEGVIPSRELSIKHDVDPNEVVAVGDHIEALVLQKEDKEGRLILSKKRAQYERAWGTIEE
IKEKDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELDK
NRNNVVLSRRAWLEQTQSEVRQNFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHVS
ELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATMEDPWQTFARTHAIGQVVP
GKVTKLVPFGAFVRVDEGIEGLVHISELAERHVEVPEQVVNVGDEIFVKVIDIDLDRRRI
SLSLKQANEGLTGDIETDQFDPALYGMAATYDDQGNYIYPEGFDPETGEWLEGYDAQREV
WEGQYAEAHTRYESHQKQIAEARKADAEAGVQENAEGAPSSYSSGVVEETTGGALASDEA
LAALREKLSGGQS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagcaccgagaccgcccgaacgcctcaggtcgccatcaacgacatcggttcg
gcggaggaattcctcgccgcgatcgacctgaccatcaagtacttcaacgacggcgacatc
gtcgaaggtgtcatcgtcaaggtcgaccgggatgaagtcctgctcgacatcggttacaag
accgagggtgtgatcccgtccagggagctctcgatcaagcacgacgtcgaccccaacgag
gtcgtcgccgtgggcgaccacatcgaggccctcgtcctccagaaggaggacaaggaaggc
cgcctgatcctgtccaagaagcgcgcgcagtacgagcgcgcctggggcacgatcgaggag
atcaaggagaaggacggcatcgtcaccggtaccgtcatcgaggtcgtcaagggtggtctc
atcctggacatcggtctccgtggcttcctgccggcctccctggtcgagatgcgccgcgtg
cgcgacctgcagccgtacgtcggcaaggagctcgaggccaagatcatcgagctggacaag
aaccgcaacaacgtggtcctgtcccgccgcgcctggctcgagcagacccagtccgaggtc
cgccagaacttcctcacgaccctgcagaagggtcaggtccgctccggcgtcgtgtcctcg
atcgtcaacttcggcgcgttcgtggacctcggcggcgtggacggtctggtgcacgtcagc
gagctgtcctggaagcacatcgaccacccctccgaggtcgtcgaggtcggccaggaggtc
acggtcgaggtcctggacgtcgacatggaccgcgagcgcgtctcgctgtccctgaaggcg
accatggaggacccgtggcagaccttcgcccgcacccacgccatcgggcaggtcgtgccg
ggtaaggtcaccaagctggtgccgttcggcgcgttcgtccgggtggacgagggcatcgag
ggcctggtccacatctccgagctggccgagcgccacgtggaggtcccggagcaggtcgtc
aacgtgggcgacgagatcttcgtcaaggtcatcgacatcgacctggaccgccgtcgcatc
tcgctgtcgctgaagcaggccaacgagggcctcaccggcgacatcgagaccgaccagttc
gacccggcgctgtacggcatggccgccacctacgacgaccagggcaactacatctacccc
gagggcttcgacccggagacgggcgagtggctcgagggctacgacgcccagcgcgaggtg
tgggaggggcagtacgccgaggcccacacccgctacgagtcgcaccagaagcagatcgcc
gaggcccgcaaggccgacgccgaagccggtgtccaggagaacgccgagggtgcgccctcg
tcctactcctcgggtgtcgtcgaggagaccaccggcggtgccctggcctccgacgaggcc
ctggccgcgctgcgcgagaagctgtcgggcggccagagctga
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