Catenulispora acidiphila: Caci_6026
Help
Entry
Caci_6026 CDS
T00967
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cai
Catenulispora acidiphila
Pathway
cai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Caci_6026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cai03400
]
Caci_6026
Enzymes [BR:
cai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Caci_6026
DNA repair and recombination proteins [BR:
cai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Caci_6026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
PhoH
NAT10_TcmA_helicase
HHH
PIF1
TraI_hel_assoc_N
NPHP3_N
RsgA_GTPase
UvrD_C
AAA_16
AAA
DEAD
DUF7936
AAA_5
P-loop_TraG
DUF815
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ACU74883
UniProt:
C7QGK3
LinkDB
All DBs
Position
6945319..6947547
Genome browser
AA seq
742 aa
AA seq
DB search
MAAPTTEPHGTLSVVEGVLERITFANEETGYTVARVDTGHGAADLLTVVGALLGAQPGES
LRMRGRWGSHPQYGKQFMVDNYTQVLPATVAGIQKYLGSGLIKGIGPKTAEKIVGHFGVD
TLTVIDETPARLIEVPTLGPKRTKLIAAAWIEQKAIKEVMVFLQSVGVTTSISVRIYKEY
GDASIDVVKQEPYKLASDVWGIGFKTADAIAVAVGIPHDSPERVKAGIQYALSQSSDAGN
CYLPREKLLEESVKILTVPTELTSHCLDELIEAEGVVAEDIPDPDGYDPDEPIRAIYLVP
FHRAEASLAAQLRRLLEAPDDRLASFATVDWDKALGWLKDRTGADLAPEQTAAVQQALTA
KVSVLTGGPGCGKSFTVRSIVELAQAKRARVVLAAPTGKAAKRLTELTGAEAMTVHRLLE
LKPGGDAAYDRDRPLEADLVVVDEASMLDVLLANKLVKAVAPGAHLLLVGDVDQLPSVGA
GEVLRDLLAAPRVPRVRLTQVFRQAQQSGVVVNAHRINSGKPLELKGFDDFFLFVEDETE
DAARVAVELATTRIPKRFGFDPRRDIQVLTPMHRGPAGAGTLNGLLQETLTPSQPSRPEK
RFGGRTFRVGDKVTQIRNNYDKGKNGVFNGTGGVITSMLLEEQTLVVHTDEDEEVTYEFA
ELDELQHAYAMTVHRSQGSEYPVVVVPVTMSAWMMLQRNLLYTAVTRAKKLVVLVGSKRA
LAQAIRTMSAGKRFTGLDYRLR
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcaccgaccaccgagccccacggcaccctgtcggtcgtcgagggcgtgctggag
cggatcaccttcgccaacgaggagaccggctacaccgtcgcgcgcgtcgacaccggccac
ggcgccgccgacctgctgacagtggtcggcgcgctgctcggcgcgcagcccggcgaatcg
ctgcggatgcgcggccgctggggctcgcatccgcagtacggcaagcagttcatggtcgac
aactacacgcaggtcctcccggcgaccgtcgcgggcatccagaagtacctgggctccgga
ctcatcaagggcatcggcccgaagaccgccgagaagatcgtcggccacttcggcgtggac
acactcacggtcatcgacgagacgccggcccgcctgatcgaggtcccgaccctgggaccg
aagcgcaccaagctcatcgcggcagcgtggatcgagcagaaggccatcaaagaggtcatg
gtcttcctgcagtcggtcggggtgaccacatcgatctcggtgcggatctacaaggagtac
ggcgacgcctcgatcgacgtcgtgaaacaggagccttacaagctcgcctcggacgtgtgg
ggcatcggcttcaagaccgccgacgcgatcgcggtggctgtcggcatcccgcacgactcg
ccggagcgcgtaaaggccggcatccagtacgcgctatcgcagagctctgacgctggtaac
tgctatctgccacgcgagaagctcctggaggagtctgtcaaaatcctgacggtccccacc
gagctcacctcccactgccttgatgaactcatcgaggcagagggagtcgtcgccgaggac
atcccggatcccgacggctacgaccccgacgagccgattcgcgccatctacctcgttccc
ttccaccgcgccgaagcctcgctggccgcccagctacggcgcctgctggaggcgccggac
gaccgcctcgcctcgttcgccacggtcgactgggacaaggctctgggctggctgaaggac
cgcaccggcgccgacctcgcgccggagcagaccgcggcggtgcagcaggcgctgacggcg
aaagtcagtgtcctgaccggcggcccgggctgcggcaagtcgttcacggtgcgctcgatc
gtggagttggcgcaggccaagcgggcgcgcgtggtcctggccgccccgaccggcaaggca
gccaagcgcctgaccgagctgaccggcgccgaggcgatgaccgtgcaccgcctgctggag
ctcaagccaggcggggacgccgcgtacgaccgggaccggccgctggaggccgacctcgtg
gtggtggacgaagcctcgatgctggacgtcctgctggcgaacaaactggtcaaggccgtc
gcccccggcgcacacctgttgctggtcggcgacgtggaccagctcccctccgtcggcgcc
ggcgaggtgctgcgcgatctcctagccgcgccccgagtgccccgcgtacgcctgacgcaa
gtcttccgccaggcgcaacagtccggcgtcgtggtgaacgcgcaccggatcaactcgggg
aaaccgttggagctcaagggattcgacgacttcttcctgttcgtcgaggacgagaccgag
gacgccgcacgcgtcgccgtcgagctggccacgacccgcatccccaaacgcttcggcttc
gacccccgccgcgacatccaggttctgactcccatgcaccgcggcccagccggcgccgga
accctcaatgggctcctgcaagaaacgctgaccccctcccagccctcgcgccccgagaag
cgcttcggcggccgcaccttccgcgtcggcgacaaggtcacgcagatccgcaacaactac
gacaagggaaagaacggcgtcttcaacggcaccggcggcgtcatcacctccatgctcctg
gaggagcagaccctggtggtacacaccgacgaggacgaagaggtgacgtatgagttcgcg
gagctggacgagctacagcacgcctacgccatgacagtgcaccgatcgcagggctctgaa
taccccgtagttgtggtccccgtgacaatgagcgcctggatgatgctgcaacgaaacctg
ctctacacggcagtcacgcgcgcgaagaagctggtggtcctggtcggctcgaaacgcgcc
ctggcacaagcgatccgcacgatgtccgcaggcaaacgcttcaccggcctggactaccgc
ctgcgatga
DBGET
integrated database retrieval system
