Catenulispora acidiphila: Caci_7110
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Entry
Caci_7110 CDS
T00967
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cai
Catenulispora acidiphila
Pathway
cai03030
DNA replication
cai03430
Mismatch repair
cai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Caci_7110
03430 Mismatch repair
Caci_7110
03440 Homologous recombination
Caci_7110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cai03032
]
Caci_7110
03400 DNA repair and recombination proteins [BR:
cai03400
]
Caci_7110
Enzymes [BR:
cai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Caci_7110
DNA replication proteins [BR:
cai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Caci_7110
DNA repair and recombination proteins [BR:
cai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Caci_7110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ACU75940
UniProt:
C7Q6S7
LinkDB
All DBs
Position
8271319..8274888
Genome browser
AA seq
1189 aa
AA seq
DB search
MSDSFVHLHVHTEYSMLDGAARLKDMFKHASSLGMPAVAMTDHGNMHGAADFTKQAMAAG
IKPILGIEAYVAPESRYNAKPVRWGQPHQKSDDVSGGGLYGHATIWAQNVTGLQNLTKLS
SRAFTEGFARKYPRMDAELMAEHSAGLMATTGCPSGFVQTRLRLGHFDEALAAAGQYQEI
FGKENFYLELMDHGLDIETRVREGLLDIGRKLNIPPVVTNDSHYTYREESAAHDALLCIQ
TASNIADPDRFRFGGDGYYLKSADEMRAINTDDIWQEGCRNTLAIAEKVNPEGMFAYRNL
MPRLEAPDGLTEDQWFRKLAYDGLNKRFPAGVPDEKVYHARLEFELDVILSMGFPSYFIV
VADFINWAKDNGIAVGPGRGSAAGSLVAWSLGITDVDPIPFDLLFERFLNPDRVTPPDID
IDFDDRRRSDVIRYVTEKYGEDKVAMIATFGRIKAKAAIKDSSRILGYPFAMGDRITKAM
PPDVMGKSMPLSGVFDSNHPRYGEAGEIRGMYEQDADVKKVIDTGRGVEGLIRQPGVHAA
GVIISPETITDHVPVMMRPADGVIITQFDYPTCEEIGLIKMDFLGLRNLTIITDALNNVE
TTTGKRLNTLEFPLDDPLTYELLCKGDTLGVFQLDGGPLRSLLRQMRPDNFEDVSAIIAL
YRPGPMGANSHINYAERKNNRQPITPIHPELEAPLKEVLGVSYGLIIYQEQVMAAARVLA
GYSLAQADLLRRAMGKKKKEVLDKEYVGFEKGMADNGYSAQATKAVWDVLVPFADYAFNK
SHSVAYGFIAYQTAYLKAHYPAEYMAALLTSTATDKDRSAIYLGECRRMGIKVLPPDVND
SLHQFTPVGTDIRFGLGAIRNVGENVVTSIIATRKAKGRFTSFNDFLAKVDLPVCNKRTI
ESLIKAGAFDSLGHSRRGLIEQHERAIDSVVDVKKQEALGQDSLFGSLMDGGQEAITGGI
ELAFSDIEWDKKVLLGFEREMLGLYVSDHPLSGVENLLASKADCSIASLTGENDRADGSI
VTIAGLVAGLARKVTKQGNTWAAASVEDLEGGIETMFFPQTYQLYSTQLAEDAVVVVKGR
LDKRDEVPKLIAMEVAVLDISTAGSSAPVVLHVSESRVIPATVERLKRILTRHPGTTPVR
MHLKSRDEKVIRYQLGDNLRVANSPALSSDLKVLLGAGCFGADPSQAAE
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgattccttcgtccacctgcacgttcacaccgagtattcgatgctcgacggtgcg
gcacgactgaaggacatgttcaagcatgcctcctcgttgggcatgccggcggtggcgatg
accgaccacgggaacatgcacggcgcggccgacttcaccaagcaggcgatggccgcgggc
atcaagccgatcctcggcatcgaggcctacgtggcgccggaatcgcgctacaacgccaag
ccggtccgctggggtcagccgcaccaaaaatccgacgacgtctccggtggcggactctac
gggcacgccaccatctgggcccagaacgtcaccggtctgcagaacctcaccaagctctcc
tcccgcgccttcaccgagggcttcgcgcgcaagtacccgcgcatggacgccgagctcatg
gcggagcactccgccggtctgatggccaccaccggctgcccctcgggcttcgtgcagacc
cggctgcgcctggggcacttcgacgaggcgctggccgccgccgggcagtaccaggagatc
ttcggcaaggagaacttctacctggagctgatggaccacggtctggacatcgagacccgg
gtccgcgaagggctgctggacatcgggcgcaagctcaacatcccgccggtggtcaccaac
gactcgcactacacctaccgcgaagagtccgccgcgcacgacgcgctgctgtgcatccag
accgcctcgaacatcgccgaccccgaccgcttccggttcggcggcgacggctactacctg
aagagcgccgacgagatgcgggcgatcaacaccgacgacatctggcaggagggctgccgg
aacactctggcgatcgcggagaaggtgaacccggaggggatgttcgcctaccggaacctc
atgccgcggctggaggcgccggacgggctgaccgaggaccagtggttccgcaagctcgcc
tacgacggcctgaacaagcggttcccggccggcgtcccggacgagaaggtctaccacgcc
cgcctggagttcgagctcgacgtcatcttgtcgatgggcttcccctcctacttcatcgtg
gtcgcggacttcatcaactgggccaaggacaacggcatcgccgtgggtccgggccgcggt
tcggccgcggggtcgctggtcgcctggtccctgggcatcaccgacgtcgacccgatcccg
ttcgacctgctcttcgagcggttcctgaaccccgaccgcgtcaccccgcccgacatcgac
atcgacttcgacgaccgccgccgctcggacgtgatccggtacgtcaccgagaagtacggc
gaggacaaggtcgcgatgatcgccaccttcggccggatcaaggccaaggcggcgatcaag
gactccagccggatcctgggctacccgttcgcgatgggcgaccgcatcaccaaggcgatg
ccgccggacgtgatgggcaagtcgatgccgctgtccggggtgttcgacagcaaccacccg
cgctacggcgaggccggcgagatccgcgggatgtacgagcaggacgcggacgtcaagaag
gtcatcgacaccggccgcggcgtggagggcctgatccgccagcccggcgtgcacgccgcc
ggcgtcatcatctccccggagacgatcaccgaccacgtgccggtcatgatgcgccccgcc
gacggcgtcatcatcacgcagttcgactatccgacctgcgaggaaatcggcctgatcaag
atggacttcctgggtctcaggaacctgacgatcatcaccgacgcgctgaacaacgtggag
accaccaccggcaagcggctcaacacgctggagttcccgctcgacgacccgctgacctac
gagctgctgtgcaagggcgacaccctcggggtgttccagctcgacggcgggccgctgcgc
tcgctgctgcggcagatgcgcccggacaacttcgaagacgtctcggccatcatcgccctg
taccgccccgggcccatgggcgcgaactcgcacatcaactacgccgagcgcaagaacaac
cggcagccgatcacgccgatccacccggagctggaggcgccgctgaaggaagtcctcggc
gtcagctacggcctgatcatctaccaggagcaggtgatggcggccgcgcgagtgctcgcc
ggctactccctggcccaagcggacctgctgcgccgggcgatgggcaagaagaagaaggaa
gtcctcgacaaggagtacgtgggcttcgagaagggcatggccgacaacgggtattcggcc
caggccaccaaggcggtctgggacgtcctggtcccgttcgccgactacgcgttcaacaag
tcgcactcggtcgcctacggcttcatcgcctaccagaccgcgtatctcaaggcgcactat
ccggccgagtacatggccgcgctgctcacctcgacggcgaccgacaaggaccgctcggcg
atctacctgggcgagtgccgccgcatgggcatcaaggtgctgccccccgacgtcaacgac
tcgctgcaccagttcaccccggtcggcaccgacatccgcttcgggctcggcgcgatccgc
aacgtcggggagaacgtggtcacctcgatcatcgccacccgcaaggccaagggccggttc
acctccttcaacgacttcctggccaaggtggacctgccggtctgcaacaagcggaccatc
gaatcgctgatcaaggccggcgccttcgactccctgggacactcccgccgcgggctgatc
gagcagcacgagcgcgcgatcgactcggtggtggacgtcaagaagcaggaggcgctgggc
caggactcgctgttcggctcgctgatggacggcgggcaggaggccatcaccggcgggatc
gagctggccttctccgacatcgagtgggacaagaaggtgctgctgggcttcgagcgggag
atgctggggctctacgtctcggaccatccgctctccggcgtggagaacctgctggcgtcc
aaggcggactgctcgatcgcctcgctcaccggggagaacgaccgcgcggacggctcgatc
gtgaccatcgccgggctggtcgccgggctcgcccgcaaggtcaccaagcagggcaacacc
tgggccgcggcgtccgtcgaggacctcgagggcggcatcgagacgatgttcttcccgcag
acctaccagctgtactccacgcagctggccgaggacgcggtggtcgtggtgaagggccgg
ctggacaagcgcgacgaggtgcccaagctgatcgcgatggaggtcgcggtcctggacatc
tcgaccgccggcagcagcgctccggtggtgctgcacgtctccgagtcccgggtgatcccg
gcgaccgtggagcggctcaagcggatcctcacccgccatccgggcaccaccccggtgcgc
atgcacctcaagagccgggatgagaaggtgatccggtaccagctcggcgacaacctgcgg
gtggccaactccccggcgctgagctccgatctcaaggtgctgctgggcgctggctgcttc
ggcgccgacccctcgcaggcggcggagtga
DBGET
integrated database retrieval system
