Catenulispora acidiphila: Caci_7655
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Entry
Caci_7655 CDS
T00967
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
cai
Catenulispora acidiphila
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cai03021
]
Caci_7655
Transcription machinery [BR:
cai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Caci_7655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
PhyR_sigma2
Sigma70_r4
NTF2
PhyR_sigma-like
Sigma70_ECF
SnoaL_4
Motif
Other DBs
NCBI-ProteinID:
ACU76479
UniProt:
C7QCL6
LinkDB
All DBs
Position
complement(8881898..8882899)
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AA seq
333 aa
AA seq
DB search
MVKNVSTTTDRDTVADQLEPFRRELTAYCYRMLGSAFEAEDAVQETLLRAWSKFEGFQGR
SQLRTWLYRIATNVCLDMAPAPQRRARPMDLFSPGSATAPNLAQLEENVWVGPIPDERVL
AGDPAEVAVGRESIRLAFIAALQKLAPRQRAVLILREVLAWSAAETAELLDSSVASVNSA
LQRARATLAEDGSASGETAKPLDDEQREFLAKYVKAFEAFDIDGLTALLRADVSLNMPPF
QLWLQGAEELRAWWNGAGGGCRGSRLLPIEANGMPAFAQYRVAEDGDGWTPWAIMVLEIR
DGRLAGIGSYLDTERLFPLFDVPARLGADGTPA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaacgtgtccacgaccacagaccgcgacaccgtcgccgaccagctcgaaccc
ttccgccgcgagctgaccgcgtactgctaccgcatgctcggctccgccttcgaggccgag
gacgcggtgcaggagaccctgctgcgcgcctggtcgaagttcgaggggttccagggccgt
tcgcagctgcggacgtggctgtaccggatcgcgaccaacgtctgcctggacatggcgccc
gcgccgcagcgccgcgcgcggccgatggacctgttctcgccgggctcggcgaccgcgccg
aacctggcgcagctggaggagaacgtctgggtcgggccgatcccggacgagcgcgtgctc
gccggggaccccgccgaggtggccgtcgggcgcgagagcatccggctggcgttcatcgcc
gcgctgcagaagctcgctccgcgccagcgggcggtgctgatcctgcgcgaggtgctggcc
tggtcggcggcggagaccgccgagctgctggactcctcggtggcctcggtcaacagcgcc
ttgcaacgcgcccgcgccacactcgccgaggacggttcggcgagcggggagaccgccaag
ccgctggacgacgagcagcgcgagttcctggccaagtacgtgaaggccttcgaggccttc
gacatcgacggcctgaccgccctgctgcgcgccgacgtctcgctcaacatgccgcccttc
cagctctggctgcaaggcgctgaggagctgcgcgcttggtggaacggcgccggagggggc
tgccgcgggtcgcggctgctgccgatagaagccaacgggatgccggcgttcgcgcagtac
cgggtcgccgaggacggcgacggctggacgccgtgggcgatcatggtcctggagatccgc
gacggccggctcgccggcatcggcagctacctggacaccgagcgactgttcccgctgttc
gacgtgcccgcacggctcggcgccgacggcacaccggcctga
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