Catenulispora acidiphila: Caci_7708
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Entry
Caci_7708 CDS
T00967
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
cai
Catenulispora acidiphila
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cai03021
]
Caci_7708
Transcription machinery [BR:
cai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Caci_7708
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_Crp_2
MarR
HTH_3
HTH_23
Sigma70_ECF
DUF7343
HTH_5
GerE
HTH_24
PF0610-like_N
HTH_26
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
ACU76532
UniProt:
C7QCR9
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All DBs
Position
8944452..8945513
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AA seq
353 aa
AA seq
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MRAFEPDEIPAARRAGYGEGQRGTPAAAAGDEDTPDAPDAPDEPDTEAEDGDFDEPSLEI
DELGVVLEHDEPDTETDGETAAPAATTSFPLRRPPRQGGPHAEAHARARELFARLNELPE
GSTERKQIRDELVQMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDTERGVEF
STYATPTVIGEIKRHFRDKGWAVRVPRRLQELRLSLTSATSELSQRNRRSPTVAELAEYL
KISEEEVLEGLESANAYSTLSLDVSEGGDEDSPAVADSLGSEDEALEGVEYRESLKPLLE
QLPPREKKILLLRFFGNMTQSQIAEEIGISQMHVSRLLARTLEQLRAQLLVDE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgccttcgagccggacgagatcccagccgcccgccgggccgggtacggcgagggg
cagcggggaacgcccgcggccgccgccggggacgaggacacgccggacgctccggacgcc
ccggacgagcccgacaccgaggccgaggacggcgacttcgacgagcccagcctggagatc
gacgagctcggcgtggtcttggagcacgacgagccggacaccgagaccgacggcgagacc
gccgccccggccgcgacgacctccttccccctgcgccgcccgccgcgccagggcggcccg
cacgccgaggcgcacgcccgcgcccgcgaactgttcgcccgcctgaacgagctccccgag
ggctccaccgagcgcaagcagatccgcgacgagctggtccagatgcacctgcccctggtg
gagcacctggcccggcgcttccgcaaccgcggcgagccgctggacgacctgacccaggtg
gcgaccatcggcctgatcaagtccgtcgaccgcttcgacaccgagcgcggcgtggagttc
tccacctacgccacaccgaccgtcatcggcgagatcaagcgccacttccgcgacaagggc
tgggcggtccgcgtcccccgccgcctccaggagctccggctgtcgctgaccagcgccacc
tccgagctctcgcagcgcaaccgccgctcccccaccgtcgccgaactggccgagtacctc
aagatctccgaagaagaggtcctggaaggcctggaatcggcgaacgcctactccaccctg
tccctggacgtctccgaaggcggcgacgaggactcgccggccgtcgcggactccctcggc
agcgaggacgaggcactcgagggcgtggagtaccgggagtcgctcaagccgctcctggag
cagctgccgccgcgcgagaagaagatcctgctgcttcgcttcttcggcaacatgacgcag
tcgcagatcgccgaggagatcggcatctcgcagatgcacgtctcccgcctgctggcgcgg
accctggagcagctgcgggcgcagctgctcgtggacgagtga
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