Catenulispora acidiphila: Caci_7756
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Entry
Caci_7756 CDS
T00967
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cai
Catenulispora acidiphila
Pathway
cai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Caci_7756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cai03000
]
Caci_7756
03400 DNA repair and recombination proteins [BR:
cai03400
]
Caci_7756
Enzymes [BR:
cai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Caci_7756
Transcription factors [BR:
cai03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Caci_7756
DNA repair and recombination proteins [BR:
cai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Caci_7756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ACU76580
UniProt:
C7QDZ2
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All DBs
Position
8993631..8995325
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AA seq
564 aa
AA seq
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MPETALLDDFDTYYRAVASRDTRFDGRFFTGVTTTGVYCRPICPARTPKPENVRFFRVAA
AAEAAGFRTCRRCRPDKVPGSPDWNIRADLAGRALRLIADGAADQQDGVAALARTLAVSE
RHLHRVLVAELGVGPLTLARSRRAQTARLLLESTALPVSDVAFAAGYGSIRQFNDSVREA
FGATPSEIRVRFGSGAAAAELAGSAVEGDGALTLRLTYRTPFDFAALLGWFGDRAIPGVD
EVVGTGRDLVYRRALRLPHGTGQVELRDDKGVVHARLVVDDLRDVAVAVRRCRDLLDLDA
DPAQVDAVLAGDPALAPLVAARPGLRVPGAVDGFEIAVRAVLGQQISVAAARTMTARLVQ
RFSAVELAAEAALVPNAALPAVSPAVSGSPTATSALAAASGATRDPDKDSDPEAAPASHF
VDKKADLLPFPRPETLAAGDYEGLGLTRRTVATLRALATAVASGDLALDRGVDRTEARAK
LLAVPGIGPWTADYVALRVFGDPDAFPVGDLIVRRQAERLGLPGAEKALLAHAESWRPWR
AYAALHLWASSGDPVIEATEGTEQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagacagcgcttctggacgacttcgatacgtactaccgggcggtggccagccgt
gacacgcggttcgacggccgtttcttcaccggcgtgaccacgaccggcgtctactgccgg
ccgatctgcccggcccgcacgcccaagccggagaacgtgcgcttcttccgggtcgccgcg
gccgccgaggccgccggcttccggacctgccgccgctgccgcccggacaaggtcccgggc
tcgccggactggaacatccgcgccgacctggccgggcgcgcgctgcgcctgatcgccgac
ggagcggccgaccagcaggacggcgtcgccgcgctggcccgcaccctggcggtgagcgaa
cggcacctgcaccgggtcctggtcgccgaactcggcgtcggaccgctgaccctggcccgc
tcccgccgcgcccagaccgcgcgcctgctcctggagtcgacggcgctgccggtctcggac
gtcgccttcgccgccggctacggctcgatccgccagttcaacgactcggtccgcgaagcc
ttcggcgccaccccgagcgagatccgcgtccgcttcggcagcggagcggcagccgccgag
ctcgccggcagcgcggtggaaggagacggcgcgctgaccctgcggttgacgtaccggacc
ccgttcgacttcgcagcactgctcggctggttcggcgaccgcgcgatccccggcgtcgac
gaggtcgtcggcaccggccgcgacctggtctaccgccgcgcactccgcctcccccacggc
accggccaggtggaactgcgcgacgacaagggcgtggtccacgcccgcctggtggtcgac
gacctgcgcgacgtggccgtagccgtccgccgctgccgcgacctcctcgacctcgacgcc
gacccggcgcaggtcgacgcagtcctggccggcgacccggcactggcgcccctggtcgcc
gcccgacccgggctgcgcgtgcccggtgcggtggacggcttcgagatcgcggtgcgcgcc
gtgctcggacagcagatcagcgtcgctgccgcacgcaccatgaccgcacgcctggtccag
cgcttcagcgccgtcgagctggcggcggaagcggcactggtgccgaacgcggcccttcca
gcggtgtcccctgcggtcagcggctcgccgacagctacgtcggcgctggcagcagcgtct
ggtgcgacgcgcgacccggataaggactcggacccggaagccgccccggcaagtcacttt
gtcgacaagaaagcggacctcctccccttcccgcgccccgagaccctggccgccggcgac
tacgaaggactcggtctcacccgccgcaccgtggcgaccctgcgcgcgctggccaccgcc
gtcgcgagtggcgacctcgccctggaccgcggcgtcgaccggaccgaggcgcgggcgaag
ctgctggccgtgcccggtatcggtccgtggaccgccgactatgtcgcgctgcgcgtgttc
ggcgaccccgatgccttccccgtcggcgacctgatcgtgcgccgccaggccgaacgcctg
gggctgccgggcgccgagaaggccctgctggcccacgccgagagctggcgtccctggcgc
gcctatgccgcgctgcacttgtgggccagttccggcgaccccgtcatcgaagcaaccgaa
ggaaccgaacagtga
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