Catenulispora acidiphila: Caci_7807
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Entry
Caci_7807 CDS
T00967
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cai
Catenulispora acidiphila
Pathway
cai03420
Nucleotide excision repair
cai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Caci_7807
03430 Mismatch repair
Caci_7807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cai03400
]
Caci_7807
Enzymes [BR:
cai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Caci_7807
DNA repair and recombination proteins [BR:
cai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Caci_7807
MMR (mismatch excision repair)
Other MMR factors
Caci_7807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ACU76631
UniProt:
C7QE43
LinkDB
All DBs
Position
complement(9052855..9056229)
Genome browser
AA seq
1124 aa
AA seq
DB search
MIRDTEDLKALLGVPYTEEQLEAITAPLEPAVIVAGAGSGKTTVMAARVVWLVGTGQVGP
HEVLGLTFTNKAAAELAERIRKALRKLEDEELDDPDSDLTESVGEPTVSTYHAYADRLIK
EHGLRLGLEPSARLLADATRYQLAVTAVRGPKELRYFKGKVADLADKVLALDGELSEHLV
SPEELREHEEAFIGQAESFRDPKSGKAKRGYTDFLKAAEIARQRVELSELVERYRDLKVR
RDLIDFGDQMVLGARLAEERPEVGAIEREKFKVVLLDEYQDTSVAQRRMLVGLFGGGHPV
TAVGDPCQSIYGWRGASVANLDDFPDHFAKADGARSRGYTLSENRRSGGHLLEFANVVSD
PLRQRHTGVRELRPSAEKADQGWTRVGLTETAEEEVRWVARMVADAHYRGGVSLREIAVL
VRKGNQIPPLYEEMHAQGLPVEVVGLSGLVHLPEVADLIAMLDVLDEPIANASLVRLLTG
PRWRIGARDLALLGMRARELVRDPAEYADRAGRDRLAEAVAGSDPTEVVSLSDAMADPGP
DLPFSEAARVRFARFASEIRILRRRLSEPVLDVLHRVISVTGLDVEVAASPKLVAQRSSE
TLAAFLVRAADFQDLEGDQSVTAFRAYLKAAERHERGIDASLPSQGDSVKLLTMHKSKGL
EWDAVFVPHLSGAGQKPRESWIGSGAVLPYPLRGDAEHLPVLDDAGNTAAFKSFKEQAKE
YESWEDLRLEYVTVTRPRYYLTASGHWWGPTQKKRRGPDTWLSGLFEHCQDGHGEVVAWA
AEPDPDAVNPSLGATEAHWPVLPDAEAAERRRIGAEMVVTALRRRQAEAFGEPIGAEPAS
EEPQAAEQPDAGAGEGALARSGALEPVPFFDENGEPMTDLLPAQRAPEAPGEPHVIDAEH
AATAEDRSAIASWDRDLEALLEELKRGDSIQRYAPLPSSMSASQLLRYRNDPSRFRRELA
RPMPQPPQPSARLGTKFHAWIESLFGQQALFEYEDLPGAADEEIADEVDLKELQDAFLRT
PWADSVPAAVEQPFQVVLSGRVVRGRIDAVYKTPDGWEVVDWKTSRSQDADPVQLAVYRL
AWAEMRGVPLSAVSAAFVYVRGGETVRPTGLPDREELEELFGDG
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgggacaccgaagatctcaaagcactgctcggggttccttacacggaagaacag
ctcgaagccatcacggcgccgctcgagccggccgtcatcgtggccggcgcggggtcgggg
aagacgaccgtgatggctgcccgcgtcgtgtggctggtcgggaccggccaggtcgggccg
cacgaagtgctcgggctgaccttcaccaacaaggccgccgccgagctggcggagcgcatc
cgcaaagccctgcggaagctggaagacgaagaactcgacgacccggattccgacctcacg
gaatcggtcggcgagcccacggtctcgacctaccacgcctacgccgaccgcctgatcaag
gagcacggcctgcgcttgggtctggagccctcggcgcggctgctcgccgacgccacgcgc
taccagctggccgtcaccgccgtgcgcggtcccaaggagctgcgctacttcaagggcaag
gtcgctgacctcgccgacaaggtgctggctctggacggcgagctgtccgagcacctggtg
agcccggaagagctgcgcgaacacgaggaagccttcatagggcaggctgaatccttccgg
gaccccaagagcggcaaggccaagcgcggctacaccgacttcctcaaggccgccgagatc
gcccggcagcgggtcgagctgtccgagctggtcgagcgctaccgggacctgaaggtgcgc
cgcgacctgatcgacttcggcgaccagatggtgctcggcgcgcggctggccgaggagcgg
cccgaggtcggggcgatcgagcgcgagaagttcaaggtggtgctgctcgacgagtatcag
gacacgtcggtcgcgcagcgccggatgctggtcgggttgttcggtggcggccatccggtc
accgcggtcggcgacccctgccagtccatctacggctggcgcggcgcctcggtggcgaac
ctcgacgacttcccggaccacttcgcgaaggcggacggcgcccgttcccgcggctacacg
ctcagcgagaaccggcgcagcggcggccatctgctggagttcgcgaacgtggtgtcggac
ccgctgcgccagcggcacaccggcgtccgggagctgcggccctcggcggagaaggccgat
cagggctggacccgcgtcgggctgaccgagaccgccgaggaggaggtgcggtgggtcgcg
cggatggtcgccgacgcgcactaccggggcggcgtttcgctgcgcgagatcgcggtgctc
gtgcgcaagggcaaccagatcccgccgctgtacgaggagatgcacgcccaagggctgccg
gtcgaggtggtcgggctgtccgggctggtgcacctgcccgaggtcgccgacctgatcgcg
atgctggacgtgttggacgaaccgatcgccaacgcctcactcgtgcgcctgctgaccggg
ccgcgctggcggatcggcgcgcgcgacctggcgctgctcgggatgcgcgccagggagctg
gtgcgcgacccggccgagtacgccgaccgggccggccgcgaccggctggccgaggcggtc
gccggctccgacccgaccgaggtggtgtcgctgtccgacgccatggcggatccgggccct
gatctgccgttctccgaggcggcgcgggtccgcttcgcgcggttcgcctccgagatccgg
atcctgcgccgccggctgtccgagccggtcctggacgtgctgcaccgggtgatctcggtg
accgggctggacgtggaggtcgcggcgtcgccgaagctggtcgcgcagcgctcgtccgag
acgctggcggcgttcctggtccgggccgccgacttccaggacctcgagggcgatcagtca
gtaaccgctttccgtgcctatctgaaggccgccgagcggcacgaacggggcatcgacgcc
tcgctgccctcgcagggcgactcggtgaagctgctgaccatgcacaagtcgaagggcctg
gagtgggacgcggtgttcgtgccgcacctgtccggcgcggggcagaagccgcgcgagtcc
tggatcggctccggcgcggtgctgccctatccgctgcgcggcgacgccgagcacctgccg
gtcctggacgacgccggcaacaccgcggcgttcaagtccttcaaggagcaggccaaggag
tacgagtcctgggaggacctgcggctggagtacgtgacggtcacccggccgcgctactac
ctgaccgcctcggggcattggtggggtccgacgcagaagaagcgccgaggcccggacacc
tggctgagcgggttgttcgagcactgccaggacggccacggcgaggtcgtcgcctgggcc
gccgagcccgaccccgacgccgtgaaccccagcctcggcgcgaccgaggcgcactggccg
gtgctgccggacgccgaggcggccgagcggcggcggatcggggcggagatggtggtcacg
gcgctgcggcggcggcaggctgaggcgttcggcgagccgatcggcgccgagccggcttct
gaggaacctcaagctgccgagcagcccgatgccggcgctggtgaaggcgcgctcgcgcga
agtggagccctggaaccggtcccgttcttcgacgagaacggcgaaccgatgaccgatctc
ctgcctgcccaacgcgccccggaggcgccgggcgagccgcacgtcatcgacgccgagcac
gccgccaccgccgaggaccgctcggccatcgcctcctgggaccgcgacctggaagccctg
ctcgaggagctcaagcgcggcgactccatccagcgctacgccccgctcccgtcctcgatg
tcggcctcccagctgctgcggtaccgcaacgacccctcgcgcttccgccgtgagctggcg
cgtcccatgccgcagccgccgcagccctcggcgcgtctggggaccaagttccacgcttgg
atcgagtcgctgttcgggcagcaggcgctgttcgagtacgaggatctgcccggcgccgcc
gacgaggagatcgccgacgaagtggatctcaaagagctgcaggacgcgttcctgcgcacg
ccgtgggccgattccgtgccggcggccgtggagcagcccttccaggtggtgctctccggg
cgggtggtgcgcggacgcatcgatgccgtatataagactcctgacggatgggaagtcgtc
gactggaagacctcgcggtcgcaagacgcggacccggtccagctggccgtctaccggctg
gcctgggccgagatgcgcggggtgccgttgtcggcggtgtccgcggcgttcgtctacgtg
cgcggcggcgagaccgtccgcccgaccggactgcccgaccgcgaagagctcgaggagctg
ttcggagacggctga
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