Catenulispora acidiphila: Caci_8359
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Entry
Caci_8359 CDS
T00967
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
Organism
cai
Catenulispora acidiphila
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BACON_2
Motif
Other DBs
NCBI-ProteinID:
ACU77182
UniProt:
C7PWS5
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All DBs
Position
complement(9683283..9686300)
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AA seq
1005 aa
AA seq
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MKDHDSNATDPRDPADPVNRDSVSDSWGRAAAYDAYADGLHTYALGGLRHHEAAASAVYC
AFVAADHHVAHLGDAEMLRPWLYAITRHYCRAGKLPRLRLTASSAPVPAPKDAAMAGLER
TLLSAELASLDWPDTDGLSAAHREVLELSVRHGMESRAVGMMLGKPAAESFEVLSQAWHE
LERSLAALALLRTSRAHCSDLAALAEGWSGRLTAQRREPLVTHVDACSRCQYYLHKVLGA
PQAPSILPHVPAPKELRERVLGDLLDSTPEKAAEKDAIATRLTRFDPFGFPAIATTRPPS
ARPQHPHRAAAPMPVERRPRRLSALLAGRVSSAAAEAVAGEVATVPERLRTPAAASPDAK
QPANTMPERSAFDAAVVTAGNDRRRWLRRGSAELDEGPIAARRGLAGDSGTPQRGGAATG
DTRDLRNAESGVERSPRTAEFGAERGGLAEDLLGGPAAEPRREGLERGNRAAGSLAADVL
AELGAERGREGERKDLSTSAPHGGADTTGDEPTEIIGALRPEDLIASFGPARNSSVEDTL
ITARTERRPGVFDDVRPVRPTPTRTRKPVPRSSVAAAVEGRRRGVEDAQRGVAPVGDAYE
AAATVAASVAAGDAGAQVPPIAPAGVMPTAVMPLGMMPGGRAPRDNARVFQRPVGGAQDA
RRRKSGVKSALASSAVLSGVGAAGVTAFVLFVPSSPGSNKTLFSPPDPGANSAQTPDYPR
PSSSADAGPALPVAGGARASGMPGEDTVTAQVVAAELPTAPTTPTSAAAPVATDTLPFNG
PIDPPPSQTDPSQAPSDGGQLHISVSQRSNNPHDVVVTLWNSGTSPVSWTATPDAAWLTP
SATSGMLAGGAQTSLHVLVDAAGEPKGPWTAHVRFDPSGQMVSINGVGGGSGGGSPSGPS
KPSSPGGPTSSSPSGGGSSTPSSPPSSSTPSGTPTSPVSSPSAPHSSASSMPSGQSGSGP
TRSPVSPSGPGSSGSSSSSKSPNPPRHSKGPDPSPRPSGSTKPHH
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaccacgactcgaacgccacggatccccgcgatcccgcggacccggtgaaccgg
gacagcgtctccgacagttgggggcgcgcggcggcctatgacgcctacgcggacggtctg
cacacctacgccctcggcggcctgcgccaccacgaagccgccgcctcggcggtctactgt
gccttcgtcgccgccgaccatcatgtggcgcacctcggcgacgccgagatgctgcggccg
tggctgtacgcgatcacgcggcactactgccgggccgggaagctgccgcggctgcgcctg
accgcctcctcggctccggtcccggcgcctaaggacgcggcgatggccgggctggagcgc
accctgctctcggcggagctggcctccctggactggccggacaccgacgggctgagcgcg
gcgcaccgcgaggtgctggagctctcggtccgccacgggatggagagccgcgcggtcggg
atgatgctcggcaagccggcggcggagtcgttcgaggtcctgtcgcaggcctggcacgag
ctggagcgctcgctggcggcgctggcgctgctgcgcacctcccgcgcgcactgctcggac
ctggccgcgctggccgagggctggtccgggcggctcaccgcacagcgccgcgaaccgctg
gtcacacacgtcgacgcctgctcgcgctgccagtactacctgcacaaggtgctcggggcg
ccgcaggctccgtcgatcctgccgcacgtcccggcgccgaaggagctgcgcgagcgggtc
ctgggcgacctgctggacagcaccccggagaaggcggcggagaaggacgcgatcgccacc
cggctgacgcgcttcgaccccttcgggttcccggcgatagcgacgacgcggccgccgtcg
gcgcggccgcagcacccgcaccgcgccgccgcgccgatgccggtggagcgccgtccgagg
cggctgagcgccctgctggccggccgggtctcctcggccgccgccgaagcggtcgccggc
gaggtggccacggttccggaacgattacgcaccccggctgccgcgtctccggacgcgaag
cagccggcgaacacgatgcccgagagaagtgctttcgatgctgctgttgtgaccgccggg
aacgaccggcgccggtggctgcgccgcggttcggcggagctggacgagggcccgatcgcc
gcgcgccgggggcttgcgggcgattccgggacgccgcagcggggtggtgcggcgaccggg
gacacgcgggatttgaggaatgcggaatccggtgtcgaacggagcccgaggacggcggag
ttcggtgccgagcgcggcggactggccgaggacctgctcggcggcccggctgcggagccg
cgccgcgaagggctcgaacgcgggaatcgggcggcgggatcgctcgccgcggatgtgctc
gcggaactgggcgccgagcgtggtcgtgagggcgagcggaaagacctctcgacgagcgcg
ccccacggcggcgccgacaccactggcgacgaaccgaccgaaatcatcggcgctctccgc
cccgaagacctcatcgcctccttcggtccggcgcggaactcctccgtcgaggacacgctg
atcaccgcccgcaccgagcgccggcccggcgtcttcgacgacgtccggcctgtccgcccg
actcccacccgcacccggaaaccggttccccgcagctctgtcgccgccgctgtcgaaggc
cggcggcgcggcgtcgaggacgcgcagcgcggtgtcgcgccggtcggcgacgcgtatgag
gctgctgcgaccgtcgcggcgtcggtggcggccggggatgccggcgcgcaggtgccgccg
atcgcgccggcgggggtcatgccgaccgccgtcatgccgctcgggatgatgcccggcggc
cgggcgccgcgcgacaacgcgcgggtgttccagcggcccgtcggcggtgcgcaggacgcg
cggaggcggaagtcgggtgtgaagtccgcgctcgccagttccgccgtgctcagcggggtc
ggcgcggccggggtgacggcgttcgtgctcttcgtgccgtcctcgcccggcagcaacaag
acgctgttctcgccgccggatcccggtgccaactccgcgcagacgccggactacccgcgt
cccagttccagcgcggacgccggaccggcactgccggtcgccggcggcgcgcgcgcgagc
gggatgccgggcgaggacaccgtgaccgcgcaggtggtcgcggcggaactgccgacggcg
ccgacgacgccgacgtcggccgcggcgcccgtcgcgacggacacgctgccgttcaacggc
ccgatcgacccgccgccctcgcagaccgacccctcgcaggctccgagcgacggcgggcag
ctgcacatcagcgtctcgcagcgctcgaacaacccgcacgacgtggtcgtcacgctctgg
aactccggcacctcgccggtcagctggaccgcgacccccgacgccgcctggctcaccccg
agcgccacctccggcatgctggccggcggcgcccagacctcgctgcacgtcctggtggac
gccgcgggcgagccgaagggcccgtggaccgcgcacgtgcgcttcgaccccagcggacag
atggtctccatcaacggtgtcggcggcggttccggcggcggcagcccgagcggtccgagc
aagccgagcagtccgggcggcccgaccagcagctccccgtccggcggcggctccagcacg
ccgtcctcgccgccgagcagcagcacgccgtccgggacgccgaccagtccggtcagcagc
ccgagcgcgccgcacagctcggccagctcgatgccctcgggccagagcgggagcgggccc
acgcgcagtccggtttcgccgagcggtcctggctcctcgggctcttccagctcttcgaaa
tccccgaatccgccgaggcattccaagggcccggatccctcaccgcgaccctcagggtcc
accaagccgcatcactga
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