Catenulispora acidiphila: Caci_8444
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Entry
Caci_8444 CDS
T00967
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cai
Catenulispora acidiphila
Brite
KEGG Orthology (KO) [BR:
cai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cai03032
]
Caci_8444
03400 DNA repair and recombination proteins [BR:
cai03400
]
Caci_8444
Enzymes [BR:
cai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Caci_8444
DNA replication proteins [BR:
cai03032
]
Prokaryotic type
DNA Topoisomerases
Caci_8444
DNA repair and recombination proteins [BR:
cai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Caci_8444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ACU77267
UniProt:
C7PX10
LinkDB
All DBs
Position
complement(9772296..9775130)
Genome browser
AA seq
944 aa
AA seq
DB search
MAGKGSADSRGSTRRLVIVESPAKAKTIKGYLGAGYTVEASVGHIRDLPAGADEVPEKYK
GTSMGRLGVDVDGDFEPLYLVNADKRKQVAKLKDLLKEADELLLATDEDREGEAIAWHLQ
EVLKPKVPSKRMVFHEITREAIQQAVSNTRDINLQLVDAQETRRILDRLYGYEVSPVLWK
KVRTGLSAGRVQSVATRMVVDRERERIAFTAAEYWDLTGSFETLKAPAPGDPRGMTARLA
SVDGKRVASGRDFGPDGQLKSGSQNVAHLTEVTAKALAAALRDADFSVRGVERKPYRRSP
YAPFRTTTLQQEASRKLGMDSKRTMRVAQSLYENGYITYMRTDSITLSDTALNASRTQVR
ELYGADYLPDVPRRYDSKVKNAQEAHEAIRPSGDTFRTPAQTGLKGDEFRLYELIWMRTV
ASQMKDATGHTVTVKVGGAASDGRDVEFSASGRIISFHGFLKAYVEGTDDPDAALDDSEQ
RLPAVAEGDALTTTKVTADGHSTKPPARFTEASLIKEMEEREIGRPSTYSTILGTILDRG
YAFKKGTALVPSYIAFAVVGLLENHFGDLVNYEFTARMEDDLDRIARGEAQRVPWLRRFY
FGPTGEEPGAAPAALKSGGGDGAVFDHLGGLKDLVTDLGNIDAREVNSFPVGEDGIILRV
GRFGPYIERNLEDGTQQRASVPDDLPPDELTPAFAEELFLQPSGDRELGKDPSTGFEVVA
KAGRFGPYVTEILPEGTPTRGKNAVKARTGSLFKNMGLDTVTLEEALQLLSLPRVVGADP
ESGEEITVQNGRYGPYLKKGADSRSITSEEQIFTITLEEALEIYKQPKARGRGAAKPPLR
EMGPDPVSGKPIVIKSGFYGEYLTDGETNVTIPKSETVEDITPARAYELLAEKRAKGPAK
KTAKKAPAKKTAAKKTAASSGTKTAKATAAKKTAAKKTANSGTK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggcaagggttcagcggactcgcgcggctcgacgcgccggctggtcatcgtcgag
tcgccggccaaggcgaagacgatcaagggctacctcggtgcgggctacaccgtcgaggcc
tccgtcggccacatccgggacctgccggccggcgcggacgaggtgccggagaagtacaag
ggcacctccatgggccggctcggcgtggacgtggacggcgacttcgagccgctgtacctg
gtcaacgccgacaagcgcaagcaggtcgccaagctcaaggacctgctcaaggaagccgac
gaactcctgctcgccaccgacgaggaccgcgagggcgaggccatcgcctggcacctgcag
gaggtgctcaagcccaaggtcccctccaagcgcatggtgttccacgagatcacccgcgag
gcgatccagcaggccgtcagcaacacccgcgacatcaacctgcagctggtcgacgcccag
gagacccggcgcatcctggaccggctctacggctacgaggtctccccggtgctgtggaag
aaggtccgcaccgggctgtccgccggccgcgtgcagtccgtggccacccggatggtggtg
gaccgggagcgggagcgcattgcgttcaccgcggccgagtactgggacctgaccggctcc
ttcgagaccctgaaggcgccggcgccgggcgatccgcgcgggatgacggcgcggctggcc
tccgtggacggcaagcgcgtcgcctccggccgcgacttcggaccggacgggcagctcaag
tccggcagccagaacgtcgcccacctcaccgaggtcaccgccaaggcgctggccgcggcg
ctgcgggacgccgacttcagcgtgcgcggcgtggagcgcaagccctaccggcgctcgccg
tacgccccgttccggaccaccacgctgcagcaggaggccagccgcaagctcggcatggac
tccaagcgcaccatgcgggtcgcgcagagcctgtacgagaacggctacatcacttatatg
cgtactgacagcatcacgctgtcggacaccgcgctgaacgcctcgcggacccaggtgcgc
gagctgtacggcgccgactacctgccggacgtcccgcgccgctacgactccaaggtgaag
aacgcgcaggaggcgcacgaggcgatccgcccctccggcgacacgttccgcaccccggcg
cagaccggcctgaagggcgacgagttccgcctgtacgagctgatctggatgcgcaccgtc
gcctcgcagatgaaggacgcgaccgggcacaccgtgacggtgaaggtcggcggcgccgcc
tccgacggccgggacgtggagttcagcgccagcggccgcatcatctccttccacggcttc
ctgaaggcctacgtggagggcaccgacgacccggacgccgcgctggacgactccgagcag
cggctgccggccgtggccgagggcgacgcgctgaccaccaccaaggtcaccgcggacggg
cactcgaccaagccgccggcgcgcttcaccgaggcctcgctgatcaaggagatggaagag
cgcgagatcggccggccctcgacgtactccacgatcctgggcacgatcctggaccgcggg
tacgccttcaagaagggcacggcgctggtcccgtcctacatcgccttcgcggtggtcggg
ctgctcgagaaccacttcggcgacctggtgaactacgagttcaccgcgcgcatggaggac
gacctggaccgcatcgcccgcggcgaggcgcagcgcgtcccgtggctgcggcgcttctac
ttcggcccgaccggcgaggagccgggcgccgccccggccgcgctgaagagcggcggcggc
gacggcgcggtcttcgaccacctcggcggcctgaaggacctggtcaccgacctgggcaac
atcgacgcccgggaggtgaactccttcccggtgggcgaggacggcatcatcctgcgcgtg
ggccgcttcggcccgtacatcgagcgcaacctggaggacggaacccagcagcgcgcgagc
gtcccggacgacctgccgccggacgagctgaccccggccttcgccgaggagctgttcctg
cagcccagcggcgaccgcgaactcggcaaggacccctcgaccgggttcgaggtcgtggcc
aaggccggccgcttcggcccgtacgtcaccgagatcctccccgagggcaccccgacccgc
ggcaagaacgcggtgaaggcccgcaccggctcgctgttcaagaacatgggcctggacacc
gtgacgctggaggaggcgctgcagctgctgtcgctgccgcgcgtcgtcggcgccgacccg
gaatccggcgaggagatcacggtccagaacggccgctacggcccgtacctgaagaagggc
gcggactcccgctcgatcacctccgaggagcagatcttcacgatcaccctcgaggaagcc
ctcgagatctacaagcagcccaaggcccgcggccgcggcgccgccaagccgccgctgcgc
gagatgggcccggacccggtctccggcaagccgatcgtgatcaagtcgggcttctacggc
gagtacctgaccgacggcgagaccaacgtgaccatccccaagagcgagacggtcgaggac
atcaccccggcgagggcctacgagctcctcgccgagaagcgcgccaagggaccggcgaag
aagacggcgaagaaggcgcccgcgaagaagaccgccgcgaagaagacggcggcttcgtcg
gggacgaagaccgcgaaggccacggccgcgaagaagaccgccgcgaagaagacggcgaat
tcggggacgaagtag
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