Campylobacter iguaniorum: CIG1485E_0577
Help
Entry
CIG1485E_0577 CDS
T03252
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
caj
Campylobacter iguaniorum
Pathway
caj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIG1485E_0577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caj03019
]
CIG1485E_0577
Messenger RNA biogenesis [BR:
caj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CIG1485E_0577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_2
DUF4945
KH_KhpA-B
MurD-like_N
rhaM
Motif
Other DBs
NCBI-ProteinID:
AII14442
UniProt:
A0A076FAE5
LinkDB
All DBs
Position
558008..559561
Genome browser
AA seq
517 aa
AA seq
DB search
MIEILIGLGAGVVGVGAGYVVAKKINDANYDIFLEQAKAKAKAIEFEAEGILKDAKVKVS
EAEFEAKKRYDEKGTRLQKEYNQKFDDIAKKEQAILNEQEILKNSKDELEKSKNQAKVLY
EEGLNLKVSYEEKLGEALKVLERSAGLTQDEARDVVLSKVEEKSRAEIAHIVRKYEEEAK
KEAKKRVNYILAQATSRYAGEFAAERLINVVNIKNDELKGRIIGKEGRNIKTLEMVLGVD
IIIDDTPGAIVLSSFNLYRRAIATRVIERLVEDGRIQPARIEEIHKKVCDEFEASILEEG
ENILIDLGINKVHPEIVKLIGKLKFRASYGQNALAHSLEVAHLAGIIAAETGGDEKLAKR
AGILHDIGKALTHEYEGSHVDLGAEICKRYKEHPVVINAIYAHHGHEEIGSVECAAVCAA
DALSAARPGARREVLESFLKRVEEIEEIATSKEGIKQAYAINAGREIRVIANAKLVNDDE
AVLLAKEIAEEIQEKIQYPGEIKVNVIRELRAVEFAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatagagattttgatcggcttaggagccggagttgtaggtgttggcgcaggatacgta
gtcgctaagaagataaatgacgcaaactatgatatattcttagagcaagcaaaagctaag
gcaaaagccatagaatttgaggctgaaggcatactaaaagatgcaaaagtcaaggtaagc
gaagctgagtttgaagccaaaaaaagatatgacgaaaagggtactcgtctccaaaaagag
tataaccaaaaatttgatgatatagccaaaaaagagcaggctatactaaacgaacaagaa
attttaaaaaatagcaaagatgagcttgaaaagtccaaaaatcaagcaaaggttctctac
gaagaggggctaaatttaaaagtttcatacgaagaaaagcttggcgaagctcttaaagtt
ttggagcgttcagctggtttaactcaagatgaagcaagagacgttgtccttagcaaagtc
gaagaaaaaagcagagcagagatagctcacatcgtaagaaaatacgaagaagaagccaaa
aaagaagctaaaaaaagagttaattatatcttagctcaagccactagccgttacgctgga
gaatttgcagctgagcgtcttataaatgtcgtaaatatcaaaaacgatgagctaaaaggt
agaatcatcggtaaagagggaagaaatataaagacccttgagatggttcttggcgtagat
attatcatcgatgatactccaggagctatagtcttatctagcttcaatctttaccgccgt
gccattgccactagagttattgagcgtcttgtagaagatggcagaatccagccagctcgc
atagaagagatacataagaaagtctgcgatgagtttgaagctagcatacttgaagaggga
gaaaatatactaatagatcttggcataaataaagttcatcctgagattgtcaagctcatc
ggtaagcttaaatttagagctagctatggtcaaaatgctcttgctcacagtcttgaagta
gctcatttagcaggtatcatagcagctgaaactggtggagatgaaaaactagccaaaaga
gctggaatacttcacgacataggtaaggctctcacccatgaatacgaaggaagccacgta
gatcttggagccgaaatctgcaaaagatacaaagaacatccagttgtcataaacgcgatt
tatgctcaccacggacatgaggagattggcagcgtggaatgcgccgcagtttgtgccgca
gacgctctttcagcagcgcgtccaggagctagaagagaggttcttgagagcttcttaaaa
agagttgaagagatcgaagaaatagcaactagcaaagaaggtatcaaacaagcttatgct
ataaatgctggtcgcgagataagagtcatagcaaatgcaaagcttgtaaatgatgatgaa
gccgtacttttagctaaagaaatcgcagaagagatacaagagaagatccaatatccaggc
gaaataaaagtaaatgttataagagagcttagagctgttgaatttgctaaatag
DBGET
integrated database retrieval system
