Campylobacter iguaniorum: CIG1485E_1327
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Entry
CIG1485E_1327 CDS
T03252
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
caj
Campylobacter iguaniorum
Pathway
caj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
caj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIG1485E_1327 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caj03021
]
CIG1485E_1327 (rpoC)
03400 DNA repair and recombination proteins [BR:
caj03400
]
CIG1485E_1327 (rpoC)
Enzymes [BR:
caj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIG1485E_1327 (rpoC)
Transcription machinery [BR:
caj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CIG1485E_1327 (rpoC)
DNA repair and recombination proteins [BR:
caj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CIG1485E_1327 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
DUF6675
Motif
Other DBs
NCBI-ProteinID:
AII15157
UniProt:
A0A076FCN1
LinkDB
All DBs
Position
complement(1325092..1329609)
Genome browser
AA seq
1505 aa
AA seq
DB search
MSELKPIEIKEDAKPRDFEAFQLRLASPERIKAWSHGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRYKGIKCEKCGVEVTTSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGIKMKDLERVLYYEAYIVENPGDASYDNENNKKVEFYDVLNEEQYVLLEQK
FSDSGFRARMGGEVIRDMLANLDLVSILEQLKVEIESTNSEAKKKTIVKRLKVVESFLNS
GNRPEWMMITNLPVLPPDLRPLVSLDGGKFAVSDVNDLYRRVINRNARLKRLMELDAPEI
IIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFS
GRSVIVVGPKLRMDQCGLPKKMALELFKPHLLARLEEKGYATTVKQAKKMIEDKTNEVWE
CLEEVVADHPVMLNRAPTLHKMSIQAFHPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHV
PLSQEAIAECKILMLSSMNILLPASGKAVTVPSQDMVLGIYYLSLEKDGAVGANKIFASV
DEVMIAVEAHYLDIHAKIKTMVGNRTIFTTAGRLIINSILPNLENSIPENMWNKIMKKKD
IANLVDYVYKNGGLEVTAGFLDKLKNLGFRYATKAGVSISIADIIIPESKYSYVDEAKKK
VREIQNQYGSGLLTDSERYNKIVDIWTDTNNKVAAEMMKLIKTDKNGFNSIYMMADSGAR
GSAAQIRQLAGMRGLMAKPDGSIIETPITSNFREGLNVLEYFISTHGARKGLADTALKTA
NAGYLTRKLIDVAQNVKVTMDDCGTHEGVEITEITENGELIESLEERVLGRVLSDDVIDP
ITNEILFTEGTLMDETKARTISEAGIKSVSIRTPITCKAGKGVCAKCYGINLGEGKLVKP
GEAVGIISAQSIGEPGTQLTLRTFHIGGTASTEQQDRQVIAQKEGFIRYYNLKTYENKGK
SIVINRRNAAILLVEPKIKAPFDGEIDIEIAHEDVNIFVKSKTDEIKYVLRKHDLAKPNE
LAGVSGKVEGKFYVPYAKGDMVKENESIVEVIKEGWNIPNRIPFASEVKVADGDPVTQTI
VAGAKGMLKFYILKGDYLERIRDVKKGHIVNEKGLFVVVADDDDREAVRHYIPRGSVIEF
DDSQSVESKDIIVKPQSDEKLIIAEWDPYSTPVIAEEGGVVAYEDIEPGYSAAEQYDETT
GESRLVINEYLPSGVKPTITISTASGRLIRYQLEPKTAIFVKDGQSVEQADTLAKTPKAV
AKSKDITGGLPRVSELFEARRPKNTAIIAEIDGVVKFDKPLRSKERLIIMSEDGSTTEYL
IDKSRQIQVRDGEFVHAGEKLTDGLVSSHDVLRILGEKALHYYLISEIQQVYRSQGVAIS
DKHIEIIVSQMLRQVKIVDSGHTKFIVGDMVSRRKFKEENERIMKMGGEPAIAEPVLLGV
TRAAIGSDSVISAASFQETTKVLTEASIGAKFDYLEDLKENVILGRMIPVGTGLYQDKKV
KIKTN
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagttaaaacctattgaaataaaagaagacgcaaaaccaagagattttgaagcg
tttcagttaagacttgctagtccagagcgtataaaagcatggagccatggcgaagtaaaa
aaaccagaaactatcaactaccgcacgcttaaaccagagcgtgacggtctgttttgtgcg
aaaatttttggacctattcgtgattatgagtgcctttgcggaaaatacaaaaaaatgcgt
tataaaggcattaagtgcgaaaaatgtggcgttgaagtaacaacttcaaaagtccgccgt
tcacgtatgggacacattgagcttgtaactccagtggctcatatttggtatgtaaactca
cttccaagtcgtataggaacattgcttggcataaagatgaaagatttagagcgcgtactt
tactatgaagcatatatagtagaaaatccaggtgacgcatcttatgataatgaaaacaac
aaaaaagttgagttttatgatgttttaaatgaagagcaatatgtattattagagcaaaaa
tttagcgacagtggatttagagctagaatgggtggcgaagtcatccgtgatatgcttgca
aatttagacttagttagcatacttgagcaactaaaagtagagatagaaagcacaaatagt
gaagctaagaaaaaaactatcgtaaaacgcttaaaagtcgtagagagctttttaaattca
ggcaaccgtcctgaatggatgatgataacaaatttacctgtattgccaccagatcttaga
cctcttgttagtcttgatggtggtaaatttgcagtatcagatgtaaatgatttgtatcgc
cgtgttataaatagaaatgcacgccttaaaagactaatggagcttgacgcaccagaaatc
attatccgtaatgaaaaaagaatgctccaagaagcagttgatgctttatttgacaatggc
cgtagagcaaatgccgtaaaaggcgcaaacaaacgtccgctaaaatcacttagtgagatt
atcaaaggtaaacaaggtcgtttccgtcaaaacttgcttggtaagcgtgttgacttttca
ggtcgtagcgttattgttgttggaccaaaacttagaatggatcaatgtggtcttcctaaa
aaaatggctcttgagctattcaaaccacatcttttagctcgccttgaagaaaaaggttac
gcaacaacagtaaaacaagctaaaaagatgatcgaagataagacaaatgaagtttgggag
tgccttgaagaggtggttgcagatcatcctgttatgcttaaccgtgcgccgacacttcac
aaaatgtctattcaagcgttccacccagtcctaatagaaggtaaagctatccaacttcac
ccacttgtttgttcagcgttcaacgcggacttcgacggcgaccaaatggcagttcacgtt
ccgctttctcaagaagccattgcagagtgcaaaatacttatgctaagctctatgaatatc
ttgcttccagcaagtggtaaggctgtaacagttccatctcaagatatggttcttggaatt
tattatctaagccttgaaaaagatggtgcagttggtgcaaataaaatctttgctagtgtt
gatgaagttatgatagcagttgaggctcactaccttgatatccatgcaaaaatcaaaaca
atggttggaaatagaacaatatttacaactgctggacgtttgattatcaactctatactt
ccaaatttagagaattctattccagaaaatatgtggaataaaatcatgaagaaaaaagac
atagcaaatttagttgattatgtctataaaaatggtggtttagaagtaactgctggattt
ttggataagcttaaaaatcttggtttccgctatgctacaaaagctggtgttagtatatca
atagctgatattattatcccagaaagcaaatatagctatgtcgatgaggctaagaaaaaa
gttcgtgaaatccaaaatcaatatggttcaggtttgctaactgattcagaaagatacaac
aaaatcgttgatatctggacagatacaaacaataaagttgcagctgaaatgatgaagctt
atcaaaacagataaaaatggatttaactctatttatatgatggcagactcaggagctcgt
ggtagtgcagctcaaattcgccaacttgcaggtatgcgtggtcttatggcaaaaccagat
ggttcgattatcgaaactcctattacatcaaatttccgcgaaggactaaatgtattagag
tatttcatctcaacgcatggtgcaagaaaaggtctagcagataccgcgcttaaaacagca
aatgctggttatcttactagaaagcttatagacgtagctcaaaatgttaaagtaactatg
gatgattgcggcactcacgagggtgtagaaatcacagagattacagaaaacggtgagttg
atcgaaagccttgaagaaagagttttgggtagagttttaagcgatgatgtaatcgatcct
attacaaacgaaatcctctttacagagggaaccttgatggatgagacaaaggctaggaca
ataagcgaagctggtataaaatcagtaagcatcagaactcctatcacttgtaaggctggt
aagggagtttgtgcaaaatgctatggtatcaaccttggtgagggcaaacttgttaagcca
ggcgaggctgttggtatcatatcggctcaatcaattggtgagccaggaactcagctaact
ctaagaacattccacatcggtggtactgcttcaacagagcaacaagatcgtcaagttata
gctcaaaaagagggcttcataagatattataatcttaaaacttatgaaaataaaggcaaa
tctatagtaattaaccgtagaaatgctgctattttgctagttgaaccaaagataaaagct
ccatttgacggtgaaatagatatagaaatcgctcacgaagatgtaaatatctttgtaaaa
agtaaaaccgatgagattaagtatgtattaagaaaacacgatcttgcaaaaccaaatgaa
ctagctggtgttagcggtaaggttgagggtaaattctatgtcccttacgcaaaaggcgat
atggtaaaagaaaacgaaagtatcgttgaagttatcaaagagggttggaatattccaaat
cgtatcccatttgctagtgaagtaaaagtagctgacggcgatcctgtaactcaaaccata
gtagctggcgcaaaaggtatgcttaaattttacatcttaaaaggtgattatctagaaaga
atcagagatgtcaaaaaaggtcatatcgtaaacgaaaaaggactttttgttgttgtagct
gatgatgatgacagagaagcagttcgtcactatatcccaagaggcagtgtgatagaattt
gatgatagccaaagcgtagaatcaaaagacatcatagtaaaacctcaaagcgatgaaaaa
cttatcattgctgagtgggatccatattcaactccagttatcgctgaagagggcggtgtg
gtcgcctatgaggatatcgagccaggatacagcgcagcagagcaatacgatgagacaaca
ggtgagagccgtctagttatcaatgagtacttgccaagtggcgtaaaaccaactattacg
atatctacagcaagtggaagactcattcgttatcaacttgagccaaaaacagcgatattt
gtaaaagacggtcaaagtgtagagcaagctgatactttagctaagactccaaaagccgtc
gcgaaatcaaaagatatcaccggaggtcttccaagagtatctgagctatttgaagcaaga
cgccctaaaaatacagctatcatagctgagattgacggtgttgttaaatttgataaacct
ttacgttcaaaagagcgtttgattatcatgtctgaagatggatctacgactgagtatttg
atcgacaaatcacgtcaaattcaagtaagagatggcgagtttgtccacgctggcgagaag
ctaactgatggactagtaagtagccatgatgtgcttagaatacttggagaaaaggcactt
cactattatttgattagtgagattcaacaagtttatcgctcacaaggtgttgcgatcagt
gataaacacattgaaattatcgtttctcaaatgctaagacaagttaaaatagtagatagt
ggtcatactaaatttatcgtaggcgacatggtaagtagacgtaaatttaaagaagaaaat
gaacgcatcatgaaaatgggtggcgagccagcgatcgctgagccagtattgcttggtgtt
acaagagcggcgatcggtagtgatagtgttatctcagctgcatcattccaagagactaca
aaagtcttaaccgaagcaagtatcggggctaaatttgactaccttgaagacttaaaagaa
aacgttattttaggtcgtatgataccagttggtactggactttatcaagacaaaaaagtc
aaaatcaaaactaactaa
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integrated database retrieval system
