Caulobacter sp. K31: Caul_0041
Help
Entry
Caul_0041 CDS
T00651
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cak
Caulobacter sp. K31
Pathway
cak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Caul_0041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cak03019
]
Caul_0041
03016 Transfer RNA biogenesis [BR:
cak03016
]
Caul_0041
Enzymes [BR:
cak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Caul_0041
Messenger RNA biogenesis [BR:
cak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Caul_0041
Transfer RNA biogenesis [BR:
cak03016
]
Prokaryotic type
tRNA degradation factors
Caul_0041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
DUF5813
DUF7909
aRib
Motif
Other DBs
NCBI-ProteinID:
ABZ69179
UniProt:
B0T175
LinkDB
All DBs
Position
48198..50348
Genome browser
AA seq
716 aa
AA seq
DB search
MFEIMRKTIEWGGKTLVLETGRIARQADGAVLATMGETVVLATAVFAKKAKPGQDFFPLT
VNYIEKTYAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVCTVLQH
DLENDPDIVAMCAASAALVISGAPFMGPIGGCRVGYVNDEYILNPTLDELKESKMDLVVA
GTADAVMMVESEIQELSEEIVLGGVSFAHKSMQAVINGIIELAEHAAKEPFDFQPEDTDA
LKAEVKKAVGADLADAYTIRAKGDRHAALSAAKSKAVDTFAKSDANPAGIDPLKLISVFK
ELEADIVRRSILDTGIRIDGRTVDTVRPILGEVGILPRTHGSALFTRGETQAIVVATLGT
GDDEQFIDALEGTYKEAFLLHYNFPPFSVGETGRMGSPGRREIGHGKLAWRALRPMLPAK
EDFPYTIRLVSEITESNGSSSMATVCGASLAMMDAGVPLIRPVSGIAMGLILEKDGFAVL
SDILGDEDHLGDMDFKVAGTSQGLTSLQMDIKIAGITEEIMKQALAQAKGGREHILGEMN
KAMDAPREEVGDYAPKIETITIPTDKIREVIGTGGKVIREIVATTGAKVDINDEGTVKVS
ASDGAKIKAAIDWIKSITQEAEVGAIYDGKVVKVVDFGAFVNFFGAKDGLVHVSQISNER
VAKPSDVLKEGQIVKVKLLGFDDRGKTKLSMKVVDQETGEDLSKKEAVSPEEAVNT
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaatcatgcgcaagacgatcgagtggggcggcaagacgctggtcctcgaaacc
ggtcgcatcgcccgtcaggccgacggcgccgttctggccaccatgggcgaaaccgtcgtc
ctggccaccgccgtgttcgccaagaaggccaagccgggtcaggacttcttccccctgacc
gtcaactacatcgagaagacctacgccgcgggcaagatcccgggcggcttcttcaagcgc
gaaggtcgtccgtcggaaaaggaaaccctggtttcccgcctgatcgaccgcccgatccgc
ccgctgttcgtcaagggcttcaagaacgaagtccaggtcgtctgcaccgtgctgcagcac
gaccttgagaacgatcccgacatcgtcgccatgtgcgccgcctcggccgccctggtcatt
tccggcgccccgttcatgggcccgatcggcggctgccgcgtgggttacgtcaacgacgag
tacatcctgaacccgacgctcgacgagctgaaggaaagcaagatggacctggtcgtggcc
ggcaccgccgacgccgtgatgatggtcgaatccgaaatccaggaactctcggaagagatc
gtcctgggcggcgtcagcttcgcccacaagtcgatgcaggccgtgatcaacggcatcatc
gagctggccgaacacgccgccaaggagcccttcgacttccagccggaagacaccgacgcc
ctgaaggccgaagtgaagaaggccgtcggcgccgacctggccgacgcctacaccatccgc
gccaagggcgaccgtcacgccgccctgtcagccgccaagtccaaggccgtcgacaccttc
gccaagagcgatgcgaacccggccggcatcgatccgctgaagctgatctcggtgttcaag
gaactggaagccgacatcgttcgtcgctccatcctcgacaccggcatccgcatcgacggc
cgcaccgtcgacaccgtgcgcccgatcctgggtgaagtcggcatcctgccgcgcacccac
ggctcggccctgttcacccgcggcgaaacccaagccatcgtcgtggccaccctgggcacc
ggcgacgacgagcagttcatcgacgccctggaaggcacctacaaggaagccttcctgctg
cactacaacttccctcccttctcggtcggcgagaccggtcggatgggcagccccggccgc
cgcgaaatcggccacggcaagctggcctggcgcgccctgcgcccgatgctgccggccaag
gaagacttcccctacaccatccgcctggtctccgagatcaccgagtcgaacggctcgtcc
tcgatggccacggtctgcggcgcctcgctggctatgatggacgcgggcgttccgctgatc
cgtccggtctcgggtatcgccatgggcctgatcctcgaaaaggacggcttcgccgtgctg
tccgacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggcacc
agccagggtctgacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatc
atgaagcaagcgctggcccaggctaagggcggtcgcgagcacatcctcggcgagatgaac
aaggcgatggatgcgccgcgcgaagaagtcggcgactacgcgccgaagatcgaaaccatc
accatcccgaccgacaagatccgggaagtgatcggcaccggcggcaaggtgatccgcgag
atcgtcgccaccaccggcgccaaggtcgacatcaacgacgaaggcacggtcaaggtctcg
gcctcggacggcgccaagatcaaggccgcgatcgactggatcaagtcgatcacgcaagaa
gctgaagtcggcgcgatctacgacggcaaggtcgtgaaggtcgtcgatttcggcgccttc
gtgaacttcttcggcgccaaggacggcctggtccacgtcagccagatcagcaacgaacgg
gtcgccaagccctcggacgtgctgaaggaaggccagatcgtcaaagtgaagcttctcggc
ttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgaccaggaaaccggcgaa
gacctgtccaagaaggaagccgtgagcccggaggaagccgtcaacacctaa
DBGET
integrated database retrieval system
