Caulobacter sp. K31: Caul_1727
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Entry
Caul_1727 CDS
T00651
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cak
Caulobacter sp. K31
Pathway
cak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Caul_1727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cak03021
]
Caul_1727
03400 DNA repair and recombination proteins [BR:
cak03400
]
Caul_1727
Enzymes [BR:
cak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Caul_1727
Transcription machinery [BR:
cak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Caul_1727
DNA repair and recombination proteins [BR:
cak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Caul_1727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
PQQ_syn_pqqF_N_2
DUF4865
Motif
Other DBs
NCBI-ProteinID:
ABZ70856
UniProt:
B0T3H0
LinkDB
All DBs
Position
1817270..1817629
Genome browser
AA seq
119 aa
AA seq
DB search
MARVTVEDCVEKVPNRFALVLLSAHRARGISAGASLLVDRDNDKNPVVALREIADDVVDH
EGLREQLITTLQRVDEHTEAEEEAETLALLADPTHMQMSELELVRALQSDRDGGQEERY
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcaccgtcgaagattgcgtcgagaaggttcccaaccgcttcgctctggtc
ctgctgtccgcccatcgggcgcgcggcatctcggccggcgcctcgctgctcgtcgaccgc
gacaacgacaagaaccctgtcgtcgccctgcgcgagatcgctgacgacgtggtcgatcac
gaaggtctgcgcgagcagctgatcaccacgctgcaacgcgtcgacgagcacaccgaagcc
gaggaagaggccgaaaccctcgccctgctggccgatcccacccacatgcagatgagcgag
ctcgagctggttcgcgccctgcagagcgaccgcgacggcggtcaggaggagcggtactga
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