Caulobacter sp. K31: Caul_2022
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Entry
Caul_2022 CDS
T00651
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cak
Caulobacter sp. K31
Pathway
cak03030
DNA replication
cak03430
Mismatch repair
cak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Caul_2022
03430 Mismatch repair
Caul_2022
03440 Homologous recombination
Caul_2022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cak03032
]
Caul_2022
03400 DNA repair and recombination proteins [BR:
cak03400
]
Caul_2022
Enzymes [BR:
cak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Caul_2022
DNA replication proteins [BR:
cak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Caul_2022
DNA repair and recombination proteins [BR:
cak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Caul_2022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABZ71150
UniProt:
B0T6T5
LinkDB
All DBs
Position
2165286..2166176
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AA seq
296 aa
AA seq
DB search
MSEPDLAAMAALLDASGQYRVLRKPGERPVLPIPEGEKVRVGLFVDVETTGLDTRRDEII
ELAMIPFRYGLVGRIYEVMEPFHGYRQPARPISAEITALTGIDDAMVEGQSIDPEAVAAF
AAPAALVIAHNASFDRRLLERFSPVFQTKPWACSMSQIDWKDEGHEGVKLAYLAAGAGFF
YDRHRATNDCAAAIELLARDLPKSGQPALARLLEQARTPSWRIWAENSPFAMKDKLKARG
YRWSGDDAVPSRCWYVDVAEADKDAELLFLRQEIYGGEIDPLTRKIDAYDRFSDRC
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacccgatctcgccgcgatggccgcgctcctggacgcgagcggccaataccgg
gttttacgcaagccgggcgaacgcccggtcctgcccatcccggagggcgaaaaggtccgc
gtcgggctgttcgtcgatgtcgagaccacgggcctggacacccgtcgcgacgagatcatc
gaactggccatgatcccgttccgctacggtctcgttgggcggatctacgaggtgatggag
ccgttccacggctatcgccagcccgcgcgtcccatttccgccgagatcaccgccctgacc
gggatcgacgacgccatggtcgagggccagagcatcgatcccgaggcggtggcggccttc
gccgcgcccgccgccctggtgatcgcccacaacgccagcttcgatcgccgcctcctggag
cgcttcagcccggtcttccagaccaagccctgggcgtgctcgatgagccagatcgattgg
aaggacgaggggcacgaaggggtcaagctggcctatctcgccgccggagcgggcttcttc
tacgatcgccatcgcgccaccaacgactgcgccgcggccatcgagcttttggcgcgcgat
ttgcccaagagcgggcagcccgccttggcgcgactgctggagcaggcgcgcacgccaagc
tggcggatctgggcggagaactcgccgttcgccatgaaggacaagctcaaggcccgaggc
tatcgctggagcggcgacgacgccgtgccgtcacgctgctggtatgtcgacgtcgccgaa
gcggacaaggacgccgaactgctgtttctgcgtcaggaaatctacggcggcgagatcgat
ccgctgactcggaagatcgacgcctacgaccggttttccgatcgctgttga
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