Caulobacter sp. K31: Caul_2482
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Entry
Caul_2482 CDS
T00651
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cak
Caulobacter sp. K31
Brite
KEGG Orthology (KO) [BR:
cak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cak03016
]
Caul_2482
Enzymes [BR:
cak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Caul_2482
Transfer RNA biogenesis [BR:
cak03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Caul_2482
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Ortholog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Glyco_hydro_100
FhaA_N
Motif
Other DBs
NCBI-ProteinID:
ABZ71609
UniProt:
B0SWI1
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All DBs
Position
2698770..2699339
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AA seq
189 aa
AA seq
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MSDQLSLFAAPPVTDRLFFAIFPDPATAAGIAHRAAQLRAAHALSGRPLAPERFHVTLHH
LGDHAGVRRDIVAMASEAAEMIATPAFDVTFDRAASFHNGGNNPHVLQGGEGLDALKAFQ
RDLGLAMARAGLGRLADKSFTPHVTMLYDPRLVAEQAVAPVTWRVAGFTLVHSLLGRTEH
VPLQRWALR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaccagctttccctcttcgcggcgccgccggtcaccgatcggctgttcttcgcg
atctttcccgatccggcgaccgccgccgggatcgcccatcgcgccgcccagcttcgcgcc
gcccacgcgctgagcgggcggcccctggcgccagaacgttttcacgtcacgctccatcat
cttggcgaccatgcgggtgttcggcgcgacatcgtggcgatggccagcgaggcggcggag
atgatcgccacaccagccttcgacgtcacgttcgatcgcgcggccagcttccacaacggt
ggcaataatcctcatgtcctgcagggcggcgagggccttgacgccctgaaggctttccag
cgagacttgggcctggcgatggcgcgggccgggctaggccggctcgcggacaagagcttc
accccgcatgtgacgatgctctacgatcctcggttggtcgccgagcaggccgtcgcgccg
gtgacctggcgggtcgccggcttcacgctcgtccacagcctgcttggaagaaccgagcat
gtgccgctgcagcgctgggcgctgcgctga
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