Caulobacter sp. K31: Caul_2546
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Entry
Caul_2546 CDS
T00651
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cak
Caulobacter sp. K31
Brite
KEGG Orthology (KO) [BR:
cak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cak03016
]
Caul_2546
Enzymes [BR:
cak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Caul_2546
Transfer RNA biogenesis [BR:
cak03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Caul_2546
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABZ71673
UniProt:
B0SWP5
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All DBs
Position
2762790..2763959
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AA seq
389 aa
AA seq
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MTTITTTAALAAFCNELKGQPFIAVDTEFMRETTYWPKLCLIQVASPDIEACIDPLAEGM
DLEPLLEILRDPGVLKVFHAARQDVEIFNNLNAMPTPLFDTQVAGMAAGFGEQIAYDALV
RQMLKIELDKSSRFTDWARRPLSDAQLTYAVADVTHLATLFPILRERLEKAGRLAWVEEE
MKALNDPAAYDVDPEKAWRRLRPRKTGSKYLAVFKAVAAWRERTAQTRDQPRGRILKDEA
IDELATQAPTSLEGLNTLRSVPKGFGGSKFGPDLLAAIKAALADPEGYAPVLDKSGPPPP
ASAGAVVELLKVLLKARAEEAGVASKLIATVSDLEKIAADDDANTPALQGWRLEAFGSDA
LKIKRGELALVLDGARVRVVEVRRAPKAE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgatcaccactaccgccgcgctggcggcgttctgtaatgagttgaagggccag
cccttcatcgccgtggacaccgagttcatgcgcgagaccacctattggcccaagctgtgc
ttgatccaggtggcttcgccggacatcgaggcgtgcatcgatccgctggccgagggcatg
gacctcgagccgctgctggagatcctgcgcgaccccggggtgctgaaggtgttccacgcc
gcccggcaggacgtcgagatcttcaacaatctcaacgccatgccgacgccgctgttcgac
acccaggtggcgggcatggcggcggggttcggtgagcagatcgcctatgacgccctggtc
cgccagatgctgaagatcgagctggacaagtccagccgcttcaccgactgggcccgccgg
ccgctgagcgacgcccagctgacctatgccgtcgccgacgtgacccacctggccaccctg
ttcccgatcctgcgcgagcgcctggagaaggccggccgcctggcctgggtggaagaggag
atgaaggcgctcaacgatccggccgcctacgacgtcgatcccgagaaggcctggcgccgc
ctgcgtccgcgcaagaccggctccaagtacctggcggtgttcaaggccgtggccgcctgg
cgcgagcgcaccgcccagacccgcgaccagccgcgcggccgcatcctcaaggacgaggcc
atcgacgagctggccacccaggccccgacctcgctggagggtctcaacaccctgcgcagc
gtgcccaagggctttggcggctccaagttcggtcccgacctgctggcggcgatcaaggcg
gctctggccgatccggagggctacgctccggtcctggacaagtccggcccgccgccgccc
gcctcggccggcgcggtcgtcgaactgctcaaggtgctgctcaaggcccgggccgaagag
gccggcgtggcctccaagctgatcgccaccgtctctgacctggaaaagatcgccgccgac
gacgacgccaacaccccggccctgcagggctggcggctggaagccttcggctccgacgcc
ctgaagatcaagcgcggcgagctggccctggtgctggacggcgcgcgcgttcgtgtcgtc
gaagtgcgccgggctccaaaggccgaatag
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