Caulobacter sp. K31: Caul_3806
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Entry
Caul_3806 CDS
T00651
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cak
Caulobacter sp. K31
Pathway
cak03420
Nucleotide excision repair
cak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Caul_3806
03430 Mismatch repair
Caul_3806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cak03400
]
Caul_3806
Enzymes [BR:
cak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Caul_3806
DNA repair and recombination proteins [BR:
cak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Caul_3806
MMR (mismatch excision repair)
Other MMR factors
Caul_3806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABZ72932
UniProt:
B0SV42
LinkDB
All DBs
Position
complement(4126107..4127873)
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AA seq
588 aa
AA seq
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MADGAESPADAAGRVALERMFACLDEGGSFRLEAGAGAGKTYSLDKALRRLIDRRGTDLL
RQRQQVGCITYTNVAKDEIISRVEAHPAVRPETVHGFCWSILQDFQSTLRALVPELPGWA
ERLEPVGGIGARRVHYELGYPSVGEQQVTIRHEDVLALMIQAMALPKFRAVLTARYPVLL
IDEYQDTDAAFVDALKAWFLDHGEGPLIGLFGDHWQKIYGDGCGSVEHAALAVIDKNANF
RSADPIVQMLNRMRPDLPQMVSDPDAPGEARVFHTNAWPGVRRTGQGGGHWTGDTSADAA
RAYFSHIKVRLAGEGWDFAIGKTKILMLSHSVLAREQGYASIPSIYGQFNDPWLKKDDPH
IKFLTDQLEPACAAFEAQRYGNMFECFGTGMPRIRKHLDKVAWAETMTALIALRHTGSIG
DVIDFIAGQPHMRLPDAVEEREKKLADAGPDPAVGESRRITQLRKLRQVAYVELIALDRF
IDGHTPFATKHGVKGAEFENVLVIVGRGWNKYNFGQMLEWIDAGPPADKLEFFENNRNLF
YVACSRPKVRLALLFTQILTANAMAKLTAWFGAANVVALPGQLEEVMA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggtgccgaaagtcccgccgatgccgccggtcgcgtcgcgctcgaacgaatg
ttcgcgtgcctcgacgaaggtggaagctttcgtctggaagcgggcgctggagcaggcaaa
acctattcgcttgataaggcgcttcgccgtctgatcgatcggcgtgggacggacctactt
cgccagcgccagcaggttggctgcatcacgtacactaacgttgccaaagacgagataatc
tcgcgcgtcgaagcccatccggcggtgcggccagagacggtccatggcttttgctggtcg
atcctccaggattttcagtcgacactgcgtgcgctcgtgcctgagttgcccggttgggcg
gagaggctggagcccgttggcggcattggtgctcggcgggtgcattatgagcttggctat
cccagtgtcggggagcagcaggtcacgatccggcatgaggatgtgctggcgttgatgatt
caggccatggcgctgcccaagtttcgcgcggtgttgaccgcacgctatccggtgctgctg
atcgacgaataccaggacactgacgcagcgtttgtcgatgcgcttaaggcctggtttctc
gatcatggcgaaggcccattgatcgggctgttcggcgaccattggcagaagatctatggc
gatgggtgcggctcggttgagcacgccgcgcttgcggtgatcgacaagaacgccaacttc
cgatcggcggacccgatcgtgcagatgctaaaccgtatgcgccccgatctgccgcagatg
gtgagcgaccctgacgcgcctggcgaagcgcgcgtcttccacaccaatgcctggccgggc
gtgaggcgtactggacagggcggcggccattggaccggcgacaccagtgccgatgcggcc
agagcatatttcagccacatcaaggtacggcttgccggcgaaggctgggatttcgcgatc
gggaagaccaaaatactgatgctcagccacagcgtgctggctcgcgaacagggttacgcg
agcatcccgtcgatctacggtcagttcaacgacccgtggttgaagaaagatgatcctcat
atcaagttcctgaccgaccagctggaaccggcatgtgccgcattcgaagcgcagcgttac
ggcaatatgttcgagtgcttcggcacgggcatgccgcgcattcggaagcacctggacaag
gtcgcgtgggctgagacgatgacggcgctgattgcgctgaggcacaccggatcaatcggc
gacgtgatcgatttcattgccgggcagccgcatatgcggctgcccgatgcggtcgaggag
cgtgagaagaagctggcggacgcgggccctgaccctgccgtgggagagtcgcggcgtatc
actcagttgcgaaaactgcggcaggtcgcgtacgtggaactcatagcgctcgacagattc
atcgatggccatacgccgttcgcaacgaagcatggggtgaagggtgccgagttcgaaaat
gtgctcgtgatcgtcggcaggggctggaacaagtataattttggccagatgctcgaatgg
atcgacgctggtccgccggccgacaagctggagtttttcgagaataaccggaatctcttc
tacgttgcctgctcgcggcccaaggtgcgcctggcactgctcttcactcagatcctgaca
gcaaacgctatggccaaactgacggcctggtttggcgcggcaaacgtcgtggcactgccc
ggccagctcgaagaggtgatggcttga
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