Caulobacter sp. K31: Caul_4253
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Entry
Caul_4253 CDS
T00651
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
cak
Caulobacter sp. K31
Pathway
cak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Caul_4253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cak03400
]
Caul_4253
DNA repair and recombination proteins [BR:
cak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Caul_4253
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Caul_4253
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
UB2H
Microtub_bd
AAA_22
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ABZ73374
UniProt:
B0SYK7
LinkDB
All DBs
Position
4620942..4623227
Genome browser
AA seq
761 aa
AA seq
DB search
MARSPKTDPSSDNGGGVSDVSAKFIHDATLEGELGMATPMLWQPHRPARPEKSEGGRRFK
LVSDYEPAGDQPTAIAELVAGLEGKENDQVLLGVTGSGKTFTMAKVIEATQRPALILAPN
KTLAAQLYSEFKSFFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRHSA
TRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQTINEKQMMADLVAQQYKRNDA
AFERGTFRRRGDTIEIFPAHYEDRAWRISLFGDEVESISEFDPLTGKKTGDLETIKVYAN
SHHVTPRPTLRQAIISIRQELKERLAWMYENGKLLEAQRLEQRTNFDLEMIETTGSCAGI
ENYSRYLSGRKAGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRSRKWTLAEYGF
RLPSALDNRPLKFEEWDAMRPQSVHVSATPAKWELERAGGVFAEQVIRPTGLIDPPVEVR
PVSKDGASQVDDVIDEVRQAKAKGYRTLVTVLTKKMAEDLTEYMNEQGIAVRYMHSDVDT
MERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRA
ARNVDGKVILYADRITGSMERAMGETSRRREKQHQYNLEHGITPESVKRDIKDILNSPYE
RGDRVTVPIGGVAETGKPFSGDNFKAALKDMEARMREAAANLEFETAARLRDEIKRMKLM
DLEFANEALTGVGETVDKAMPKRVRAELRAEQAEAFRKARL
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggcccgatcccccaagaccgacccatcctccgacaacgggggcggcgtctccgacgtc
tccgccaagttcatccacgacgccacgctggagggcgagctggggatggcgacgccgatg
ctgtggcagccccaccgcccggcgcggccggagaagtcggaaggcggccgcaggttcaag
ctggtcagcgactacgagcccgccggcgaccagccgaccgccatcgccgaactggtggcc
ggtctggaaggcaaggagaacgaccaggtgctgctgggcgtcaccggctcgggcaagact
ttcaccatggccaaggtcatcgaggccacccagcgcccagccctgatcctggccccgaac
aagaccctggccgcccagctctacagcgagttcaagagcttcttcccccacaacgcggtc
gagtacttcgtcagctattacgactactaccagcccgaggcctacgtcccgcgcaccgac
acctatatcgagaaggacagctccatcaacgagcagatcgaccgcatgcgccactcggcg
acgcgggcgatcctggagcgcgacgacgtgatcgtcgtggccagcgtcagctgcatctac
ggcatcggctcggtcgagacctatacggccatgaccttcaccctggaggtcggccagacc
atcaacgaaaagcagatgatggccgacctggtcgcccagcagtacaagcgcaacgacgcc
gccttcgagcgcggcacgttccgccgccgcggcgacaccatcgagatcttccccgcccac
tacgaggaccgcgcctggcgcatcagcctgttcggcgacgaggtcgagagcatcagcgag
ttcgacccgctgaccggcaagaagaccggcgacctggagaccatcaaggtctacgccaac
agccaccacgtcaccccgcgccccaccctgcgccaggccatcatctcgatccgccaggag
ctgaaggagcgcctggcctggatgtacgagaacggcaagctgctggaggcccagcgcctg
gagcagcggaccaatttcgacctggagatgatcgagaccaccggctcctgcgccggcatc
gagaactacagccgctacctgtccggccgcaaggccggcgagccgccgccgaccttcttc
gaatacatccccgacaacgccctgctgttcaccgacgagagccaccagacggttccgcag
atcggcgccatgtacaagggcgaccgcagccgcaaatggaccctggccgagtacggcttc
cgcctgccatccgccctcgacaaccgcccgctcaagttcgaggagtgggacgccatgcgg
ccccagtcggtgcacgtcagcgccaccccggccaagtgggagctggagcgggccggcggc
gtgttcgccgagcaggtgatccgccccaccggcctgatcgacccgccggtcgaggtccgc
ccggtctccaaggacggggccagccaggtcgacgacgtcatcgacgaggtccgccaggcc
aaggccaagggctaccgcaccctggtcaccgtcctgacgaaaaagatggccgaggacctg
accgagtacatgaacgagcagggcatcgccgtgcgctacatgcactccgacgtcgacacc
atggagcggatcgagatcatccgcgacctgcgcctgggccatttcgacgtgctggtcggc
atcaacctgctgcgcgagggcctcgacatccccgaatgcggcctggtggccatcctcgac
gccgacaaggagggcttcctgcgctcggagacctcgctgatccagaccatcggccgcgcc
gcgcgcaacgtcgacggcaaggtcatcctctatgccgaccggatcaccggcagcatggag
cgggccatgggcgagacctcgcgccggcgcgagaagcagcaccagtacaatctcgagcac
ggcatcacgcccgagagcgtcaagcgcgacatcaaggacatcctcaacagcccctacgag
cgcggcgaccgcgtcaccgtgccgatcggcggcgtggcggagacgggcaagccgttcagc
ggcgacaacttcaaggccgccctcaaggacatggaggcccgcatgcgcgaggccgccgcc
aacctggagttcgagaccgccgcccgcctgcgcgacgagatcaagcgcatgaagctgatg
gacctggagttcgccaacgaagccctgaccggcgtcggcgagacggtcgacaaggccatg
cccaagcgggtgcgggcggagctgcgggccgagcaggccgaggcgtttaggaaggcgcgg
ctgtag
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integrated database retrieval system
