Caulobacter sp. K31: Caul_4954
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Entry
Caul_4954 CDS
T00651
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cak
Caulobacter sp. K31
Brite
KEGG Orthology (KO) [BR:
cak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cak03016
]
Caul_4954
Enzymes [BR:
cak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Caul_4954
Transfer RNA biogenesis [BR:
cak03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Caul_4954
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABZ74074
UniProt:
B0T671
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All DBs
Position
5357808..5358425
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AA seq
205 aa
AA seq
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MANFLHEGDLPDGVFAGAAAIAIDSETMGLRLGRDPLCVVQLSSGDGDAHVVRLDRATYD
APNLKRLLTDPSVVKLFHFGRFDIAMFLLHLGVMTAPVYCTKIASKLARTYTDRHGLKDV
TRELVGVELSKVQQSSDWGAATLSPEQLAYAASDVLHLHALRERLNAMLVREGRMQLAQA
AFDYLPHRAALDLAGWEDVDIFAHT
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
ttggccaacttcctgcatgaaggcgacctgcccgacggcgttttcgccggcgccgccgcc
atcgccatcgattccgagaccatgggcctgcgcctgggccgcgacccgctgtgcgtcgtc
cagctgtcgtccggcgacggcgacgcccatgtggtgcgcctggaccgcgcgacctacgac
gcccccaacctcaagcgcctgctgaccgatccgtcggtggtcaagctgttccacttcggc
cgcttcgatatcgccatgttcctgttgcacctgggtgtcatgacagcgcctgtgtactgc
accaagatcgcctccaagctggcccgcacctataccgatcgccacggcctgaaggacgtg
acgcgcgaactggtcggcgtcgagctgtcgaaggtccagcagagttcggactggggcgcg
gcgaccctgtcgccggagcaactggcctatgccgcctccgacgtgctgcacctgcacgcc
ctgcgcgagcgcctgaacgccatgctggtccgcgaaggccgcatgcaattggcccaggcc
gcgttcgactatcttccccaccgcgccgccctcgacctggccggctgggaagacgtcgac
atcttcgcccacacctga
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