Caulobacter sp. K31: Caul_4995
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Entry
Caul_4995 CDS
T00651
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cak
Caulobacter sp. K31
Brite
KEGG Orthology (KO) [BR:
cak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cak03016
]
Caul_4995
Enzymes [BR:
cak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Caul_4995
Transfer RNA biogenesis [BR:
cak03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Caul_4995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF294_C
Motif
Other DBs
NCBI-ProteinID:
ABZ74115
UniProt:
B0T6B2
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All DBs
Position
5397923..5398459
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AA seq
178 aa
AA seq
DB search
MIRLFTAVAIPAEVGDHLLLRQHGIEGARWRPREAFHITLKFIGDVQETQAVDLDEELQG
VEAPAFDLELQGVGHFGEGIEIHAVWAGLAESPDLRRLAKANEGAARRAGLKPETRLYTP
HVTLAYLKRPAVPEVAAWIQANNLLHSPPFRIDRFGLYSSWRTSEGSAYRLEAEYPLG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctgttcaccgccgtcgccatccccgccgaggtcggcgatcacctcctcctc
cgccagcacgggatcgaaggcgcccgctggcggccgcgcgaggcgttccacatcaccctg
aagttcatcggcgacgtccaggagacgcaagccgtcgacctggacgaagagctccagggc
gtcgaggccccggccttcgaccttgagctccagggcgtcggccatttcggcgaggggatc
gagattcacgccgtctgggccggcctggccgaaagccccgacctgcggcgcttggccaag
gccaacgaaggcgccgcgcgccgcgccggcctcaagcccgagacgcggctctacaccccc
cacgtcaccctggcctatctgaagcgccccgccgtgcccgaggtcgccgcctggatccag
gccaacaacctgctgcattcgccgccattccgcatcgaccgcttcggcctctattccagc
tggcgcaccagcgaaggctcggcctaccggctggaggcggagtacccgctgggctga
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