Candida albicans: CAALFM_C103830CA
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Entry
CAALFM_C103830CA CDS
T00189
Symbol
CaO19.1026
Name
(RefSeq) exosome non-catalytic core subunit
KO
K07573
exosome complex component CSL4
Organism
cal
Candida albicans
Pathway
cal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAALFM_C103830CA (CaO19.1026)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C103830CA (CaO19.1026)
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CAALFM_C103830CA (CaO19.1026)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CAALFM_C103830CA (CaO19.1026)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
CSL4_N
ECR1_N
Motif
Other DBs
NCBI-GeneID:
3644678
NCBI-ProteinID:
XP_713631
UniProt:
A0A1D8PD51
LinkDB
All DBs
Position
1:complement(803002..803994)
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AA seq
330 aa
AA seq
DB search
MTDMSNTTTDGNVSSIVVPGQYISPTYKLENSNNDSSIPVKYIPGSGTIISNINIPSPNT
STNSVKSMPIIVSTILGNVSISPIDQTPTSKPSNNDDMVIDNEQTKSDEDKDKDKYVKSY
LVSVIPKSTKHQSTTSTTTSNQSGSKAISAIALPKENDIVLVRITKITKIQAYCEIISLD
TTTNILPDSGLGNNGNGSHVSMSITGSNSQHNFNQNSIASSQSTNQSVQIYELGENFKGI
IRINDIRSTERDKLKLIDCFKPGDIVKAQVISLGDGSNYYLTTAKNELGVVFAKSENGAG
DLMYPIDWQNMIDINSGVIEKRKNANPFLQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacagatatgtcaaacactactactgatggtaatgtttctagtattgttgttccagga
caatatattagtcctacttataaattagaaaatagcaacaacgattcatctataccagtg
aaatatattcctggatcggggacaataatatcaaatatcaatatcccatcgccaaacacc
tcaacaaactcagttaaatcaatgccaattatagtatcgacaatattagggaatgtatcc
atctcacctattgatcaaaccccaacatcaaaaccatccaacaatgatgatatggttatc
gataatgagcaaactaaactggatgaagataaagataaagataaatatgttaaaagttat
ttagtttctgtgataccaaaatctaccaaacatcaatccaccacctccaccactactagt
aatcaatcaggctccaaggcaatttcagcaattgcattacctaaagaaaatgatattgta
ttagttcgtattactaaaatcactaaaatccaagcatattgtgaaatcatatcattagat
accaccaccaacattttaccagattcaggtcttggtaataatgggaatggatcacatgta
tcaatgtcaattaccggaagtaattctcaacataatttcaatcaaaattcaattgcttct
agtcaatcaactaatcaatcagtacaaatttatgaattgggagaaaattttaaagggata
attagaattaatgatattagatcgactgaaagagataaattaaaattaattgattgtttt
aaacccggtgatattgttaaagctcaagttatatcattaggtgatggatctaattattat
ttaacaacggcaaaaaatgagttaggggttgttttcgctaaaagtgaaaatggtgctggt
gatttaatgtatcctattgattggcaaaatatgattgatattaatagtggggttatagaa
aaacgtaaaaatgccaatccatttttacaataa
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