KEGG   Candida albicans: CAALFM_C107550WA
Entry
CAALFM_C107550WA  CDS       T00189                                 
Symbol
SWD2, CaO19.2790
Name
(RefSeq) WD-repeat containing protein
  KO
K14962  COMPASS component SWD2
Organism
cal  Candida albicans
Pathway
cal03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CAALFM_C107550WA (SWD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_C107550WA (SWD2)
   03036 Chromosome and associated proteins [BR:cal03036]
    CAALFM_C107550WA (SWD2)
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CAALFM_C107550WA (SWD2)
Chromosome and associated proteins [BR:cal03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     CAALFM_C107550WA (SWD2)
    COMPASS/SET1 complex (yeast)
     CAALFM_C107550WA (SWD2)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR5 WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_IFT140_2nd Beta-prop_Vps41 Cytochrom_D1 DAGAT
Other DBs
NCBI-GeneID: 3646677
NCBI-ProteinID: XP_711732
UniProt: Q59PV3
LinkDB
Position
1:<1635159..>1636253
AA seq 364 aa
MNSSRSANNSHSVSKSSSSNSVYISGTTLAALQPAKSFNYHQGASITSLDFDDAGQFSVS
SGIDKSIQLYDCHKGTHSKDIQSQKYGAHSARFTHEELNCLYASTPEPSDNNENAIRYLS
LSNNRYLRYFKGHKAQVSSIEVNPVDKTFLSSSYDGTVKLWDLKSSSAVGNLEVGQNSVI
GFDPHGVVFAIGKYSQGETGTVSLYDLKTFDKAPFLHVEIPILPGQIWNKLEFSNNGKLI
LISTDSAEHYVLDSYSGELLAVVRLAIGSVASNNWMSFKYPYTGCCTFSPCGKYLLVGTP
KSTINIYDVSNLHNSNNKPVILSRTNHILQSTNGIPKIVSFSPKMFTLATADTTVTLWSP
PEKV
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgaatagctcaagactggccaacaatagtcattctgtgtcaaagtcaagtagttctaac
tcagtatatattagtggaacaacactagcggcattacagcctgccaaatccttcaattac
catcaaggtgcttctatcacatctttagactttgatgatgctgggcaattcctggtatct
tcaggaatagacaaatccatacaattatacgactgtcataaggggacacactctaaagat
atacaatcacagaaatatggggcacattctgctagattcactcacgaagaattgaattgt
ctttatgcatcgacaccagaaccaagtgataacaatgaaaatgccattagatatctttct
ttatccaacaaccgctacttacgatatttcaaaggtcataaagcccaagtgagctccata
gaagtaaaccctgttgacaagacttttctaagttcaagttatgatggaactgtcaaattg
tgggatttaaaatcatcatcagccgtcgggaatctagaagttgggcaaaattccgtcatt
gggtttgatccacatggagttgtttttgctattgggaaatattctcaaggtgaaacagga
acagtgtccctatatgacttgaaaacatttgacaaggctcctttcttgcatgtggaaata
cctatcttgccaggacaaatatggaataaattggagttttctaacaatggtaaactaatt
cttatttctacagattctgctgaacattatgtgcttgactcgtatctgggagaactatta
gcagttgtcagattggctatagggagtgttgctagtaataattggatgtcattcaaatac
ccttacactgggtgttgtaccttttctccgtgtgggaagtacttgttggtgggcacaccc
aaatccacaataaatatttatgatgtttccaatctacacaactccaacaataaaccagtg
atattatctagaacaaaccacattctacaaagcacaaatggtattcccaaaatcgtttct
tttagtcccaaaatgtttactttagcaacggcagatactacagtaaccttatggctgcca
ccagaaaaagtgtaa

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