Candida albicans: CAALFM_C108220WA
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Entry
CAALFM_C108220WA CDS
T00189
Symbol
CCR4, CaO19.5101
Name
(RefSeq) CCR4-NOT core exoribonuclease subunit
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
cal
Candida albicans
Pathway
cal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAALFM_C108220WA (CCR4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C108220WA (CCR4)
Enzymes [BR:
cal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
CAALFM_C108220WA (CCR4)
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CAALFM_C108220WA (CCR4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CAALFM_C108220WA (CCR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
3640749
NCBI-ProteinID:
XP_717638
UniProt:
Q5A761
LinkDB
All DBs
Position
1:1801629..1803992
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AA seq
787 aa
AA seq
DB search
MNITNKFQHTPIQGQPQSNLQAQQILLSQLHQGQAQQQQQQQQQQQQQQQSSAGVLGSGF
QPSDNFGESLNQNIYQNNYQRAQPSLQQQFFPQFQQSQQQPSQQANNASQLQQPYQPAQQ
MVRQTSHFQQQQQQQPSSQQFYSQQQASVLQQQQQQQIQLQSAHQQQSSLLNMNSINVDN
PNSVYWQHQQQLCQISRGSNVPHYYARQYASNSRKAKNPYSEVKSVGLVEATRSMVASLE
DEEEKKKKPINYQGTPTTSAALLHNKKSTQDIFEDDSMEEQRMRLKTQGKQLWCQLDLSG
QGLVNISSKLFHYDFLESLYLSNNKLNSIPSSISKLRNLRTLDLSHNRINELPEELGLCF
NLRYLFLFDNNIKTLPYSFGNMIELLFIGIEGNPLEPSIANLIAEKGTKELIATLRDQTT
VKRTPKPRCWLTLEDDGEVVDSDEVYKVEPESSDNFTVLSYNTLCQHYATPKMYKFTPSW
ALQWDYRKNLLEKEVLNYNTDIVCMQEVETKTFQEFWLPVMTANGYKGYFFSKTRSKTMS
ETDSKKVDGCATFFKNDKFSLIHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALISY
LQHKESGEKIAVVNTHLHWDPAFNDVKALQVGILLEELQGIIKKYRHTNSNEDIKNSSIV
VCGDFNSVKDSAVYQLFSTGASKGHEDMNGRDYGKFTEDGFHHPFKLKSAYEAVGELPFT
NLTPAFTDNIDYIWYSTPTLQVKGLLGGVDEEYTSHSIGFPDANFPSDHVPILAKFQLKK
GKKNHSV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaccaataagtttcagcataccccgatacaaggacaaccacaatcgaatttg
caagcacaacaaattttgttgctgcaactccatcagggtcaagctcaacaacaacagcag
cagcaacagcaacagcaacagcaacagcaatcatcagctggggtacttgggtcaggcttc
caacctagtgacaactttggtgaaagtttgaaccaaaatatttatcaaaataattatcag
cgtgcccagccatcattgcagcaacaatttttcccgcaattccaacagtcacaacaacaa
ccatctcagcaagctaataatgcactgcaattacaacagccataccaaccagcacagcag
atggtacgccaaacttcacattttcaacaacaacagcaacagcaacctagcctgcaacag
ttttacagtcaacagcaggcttcggtcctccagcaacaacaacagcagcaaattcaactt
cagtcagcacatcagcaacaactgtctttacttaacatgaactctataaatgtggataat
ccaaattctgtttattggcaacatcagcagcaattatgtcagatttcaagaggatcaaat
gtgcctcattattatgccaggcagtatgcatccaattcaagaaaagcaaagaatccatat
agcgaagttaagtctgtgggattagtggaagccacaaggtctatggtagcaagtctcgaa
gacgaagaagagaaaaagaagaaaccaataaattatcaaggcactccaaccacctcggct
gcattgttgcataataagaaatcaacacaagatatatttgaggatgattcaatggaagaa
caaagaatgagactcaagactcaaggtaagcagttatggtgtcaattggatttgagtgga
caagggttggttaatatctcttcgaagttgtttcattacgactttttggagtcattgtat
ttgagtaacaataaattgaatagtatcccatccagcataagcaagttgagaaacttgaga
actttagatttatctcataatagaatcaatgaattgccagaagagttgggattgtgtttt
aatttaagatatttatttcttttcgataacaatatcaagacattgccttattcgtttggc
aacatgattgagttgttgtttattggtattgaagggaatccactagaacccagcattgcc
aatttaatcgcagaaaagggaaccaaggaactcattgcaactttgagagatcaaactacc
gttaaaagaacaccaaaaccaagatgctggttgacattggaggacgacggtgaagttgtt
gactctgatgaagtgtacaaagttgaaccagaatctagcgacaactttacagttttgtct
tacaatactctttgtcaacattatgctacacccaagatgtacaaatttactccttcttgg
gcattacagtgggattacagaaagaatttgttggaaaaagaagttttgaattacaataca
gatattgtttgtatgcaggaagtggaaacaaaaacgttccaggagttctggcttccagtt
atgactgcaaatggttacaagggttattttttctctaaaacaagatctaaaactatgagt
gaaactgattccaaaaaagtggatggatgtgctacttttttcaagaatgataaattctcc
ttgatccataaacaaaattttgaatacaatagtgtctgcatggggtcagataagtataag
aaaactaaagatttgtttaataggttcatgaataaggataatattgcattgatctcatat
cttcaacataaggagtctggcgagaaaattgcagttgtcaatactcacttgcattgggat
cctgcattcaatgatgtaaaagcattacaagttggtatcttgttagaagaattacaaggc
attattaaaaaatatcgtcatacaaattccaatgaggatatcaagaactcttctatagtc
gtttgtggtgattttaactcggtgaaagatagtgctgtttaccaattgttttccactggt
gcatcaaaaggtcatgaagatatgaatggtagagactatggtaagtttacagaagacgga
ttccatcatccgttcaaattaaaatctgcatatgaagctgtgggcgaactaccttttacc
aatttgactcctgcttttaccgacaatattgattatatatggtattcaacgccaactttg
caagtgaaaggtttacttggaggagttgatgaagaatataccagtcattcgattgggttc
cctgatgccaacttcccttctgatcatgtacccattttagccaagtttcaattgaaaaaa
ggtaagaagaaccactctgtatag
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